DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7376 and Hel89B

DIOPT Version :9

Sequence 1:NP_001261471.1 Gene:CG7376 / 38715 FlyBaseID:FBgn0035689 Length:1270 Species:Drosophila melanogaster
Sequence 2:NP_001287351.1 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster


Alignment Length:1368 Identity:262/1368 - (19%)
Similarity:452/1368 - (33%) Gaps:415/1368 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RKLKFRSIRQESGSCILVLSHEQTHVRAREIEMEVGEQVLPLFFKDFRGSLEFEVAQQ------- 114
            |...|...|..|...:..|||.........:.....|.....:.|...|.|....|.|       
  Fly   747 RDANFMRARISSSRALGALSHYLVQPAPGVVYTPQTESPTDCYTKVLLGHLNAHSAVQRIVCGLI 811

  Fly   115 ------EKEHKRPLKTYVTTKLYDALYE-KHRQTVHVEQERSLDLPKRFQSQLRKYQQRTVSWML 172
                  |.|..||....:..||:..:.| .:...|.:...|.|...:.|.:.|::          
  Fly   812 IAFWALEDEPVRPGPPNLQEKLHQCVSEYVYYDEVAISLTRLLQEAQDFIATLKQ---------- 866

  Fly   173 GREQQITQVPAN------FIVLHAIDGITRVFKHKYCLQFYPFEEEIPKISLPPGGILADEMGLG 231
                  .::|.|      .:.|..|:.:.......  |:.||.:   ||:               
  Fly   867 ------NKIPINDFNNAKILTLDQIEAVATTLSEN--LRSYPLK---PKV--------------- 905

  Fly   232 KTVEFLAMLLMNPRP-QDSYRNDYWHQRLEEFSDEVPLKRSRISKKDEVFCICTKKHG------- 288
                 |.||....|. |.||:.....|.....|.:..|..:..:    :.|:..|.:.       
  Fly   906 -----LDMLEERRRSLQASYQQTTSEQSAYHVSAQAALAGAICA----LHCLPDKLNPVVKPLME 961

  Fly   289 --KRVQCTKCRRWQHEMCMTISEK----------SDLPHLC------PSCWSELVKSGERLVESG 335
              ||.||.:.::...|..:.:.::          ..|.:||      |....:||...|.|.::.
  Fly   962 SIKREQCLQLQQLSAEFLVHLMDQVCDRNPSPNSKILNNLCTLLRSDPEFTPKLVMPLETLKQTP 1026

  Fly   336 ATIIVSPNAIKMQWFEEIHKHISPSLKVLLYFGLHSTFWVSPFDLAQYDVVLTDYTILRN----- 395
            .:..|..|.:                    |:|:        ..||....|.|..|  |:     
  Fly  1027 VSSEVINNCV--------------------YYGI--------LTLALQQTVTTTNT--RSGAGGA 1061

  Fly   396 ------------------EIYHTTDFKSDRQMRHQQRYMRPNSPLLMVNWWRVCLDEAQMVESST 442
                              ||...|:..:..:::.||                           :.
  Fly  1062 TTPTATTAPRGPGRPPTGEILSATNATAHIELKAQQ---------------------------AK 1099

  Fly   443 SAAAEMVRMLPAINRWAVTGTIDELPPLLEFVGRPEVCRPPDAWQTVDKAFQLNY----KCEPLL 503
            .|.|:..|    |.|......|::|            || ....|.::|.....:    |.|..:
  Fly  1100 EAEAKQCR----IQRLGAACAIEKL------------CR-IFGEQIIEKVAVFQHLMFGKVEQFV 1147

  Fly   504 ELLEHSLWRTCKSKVEHELGIPPQTEVVHRLELSNVESLYYREEHLKCHEQFLAAVAKHTRHNAD 568
            :  |...||.  ..:..:||:  ..|:|..::|....:.:.   |:..|.|..|           
  Fly  1148 K--EAYDWRL--GSLLPDLGV--CNELVSSMQLIETAAPHL---HVALHPQMFA----------- 1192

  Fly   569 NSSCLASISPQLLRIILKPFLRIRQTCS--VPVVFNSNVSSTDYLHPQDLLARLKSNNENECKTE 631
                   :.|.|..|:..|...:|...:  :.|:...:...|......|||..|         .:
  Fly  1193 -------LLPSLGFIVCHPLKAVRHMAARCIAVLAEIDACQTMQFVVHDLLPLL---------GK 1241

  Fly   632 LRTWASSYNGLAAIYFIKNDFPQAIKYYNLLL--KLANEYNEQNISVDSVLQIHAIYNLLQASSL 694
            :.........:.||..:.:.....:..|.:||  .|....::.:.|| .:|..|...||:|   |
  Fly  1242 IEQLIERQGAIEAIERVVSRLQIKVVPYIVLLVVPLLGAMSDPDESV-RLLSTHCFANLVQ---L 1302

  Fly   695 APAEHKLTELEHKKYQAQMSRLEWKYLEDNTRVLESALSSYNENLEKVSELEKR-FEGSTLDLLA 758
            .|.:.|..:|:....||:.:| :.::|:    .|.:..|..|..:.....:|.| ::.:.::.|.
  Fly  1303 MPLDGKTEQLKSDPLQARKTR-DREFLD----YLFNPKSIPNYKVPVPISVELRCYQQAGINWLW 1362

  Fly   759 TMVNHKTSLHDAIWNKVRDDFFRQNISVERLENVNSMAGMLYFMDIWHNK---LQNLKSTLIAEF 820
            .:  :|.:||..:.    ||....    :.|:.:..:||     |..|.:   |.||.|.:|   
  Fly  1363 FL--NKYNLHGILC----DDMGLG----KTLQTICILAG-----DHMHRQTANLANLPSLVI--- 1409

  Fly   821 EFLKGVMQQACEAIKTGVLLSMEIINFIENVTV---CHLTDILDANKDKPVKPKKHR-----YCR 877
                      |....||..: .|:..|::..:|   .|....       ||..:|.|     .|.
  Fly  1410 ----------CPPTLTGHWV-YEVEKFLDQGSVLRPLHYYGF-------PVGREKLRSDIGTKCN 1456

  Fly   878 LCL-----IRDSLNQFECLLFAK-KLDEKATVTEGLENPSMEISFIK------------------ 918
            |.:     :|..::.|..:.|.. .|||...:..|....|..|..:|                  
  Fly  1457 LVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLE 1521

  Fly   919 --SIFAF--------------------LRSKQDFSEWKEECQSKLELLSCLQDLVKF---QIKYW 958
              |:|.|                    |.|:...|..||:....|.:.:..:.::.|   ::|..
  Fly  1522 LWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKED 1586

  Fly   959 IEVEYMVKAFDELEMCKMRILLTDDPEEQSNYRILACQLDEQLQFNQYNLQTSQLNF-TRLCGRL 1022
            :..:...|...:| :|::..|.....|:.||..:..| ||:....:..::.|..|:. |.:...|
  Fly  1587 VLKDLPPKITQDL-LCELSPLQLRLYEDFSNKHLKDC-LDKLGDSSSASMVTENLSAKTHIFQAL 1649

  Fly  1023 KYLKHLKEDSADKPCPICQTQDDVRYVMMVCGHFVCQHCLDSMRRKNGRAGVTKCPLCRQDSPQL 1087
            :||::                             ||.|....:|:......||.         ||
  Fly  1650 RYLQN-----------------------------VCNHPKLVLRQSEELTKVTS---------QL 1676

  Fly  1088 YYSVRPGAHKSIIGDF--STKISSVVELVLK----IKGEN-EQEKIIVFSQWQAILIEIARAL-- 1143
            ..|      .|.:.|.  |.|:.::.:|:|.    ::.|: .|.:.::|.|.:|:|..:.:.|  
  Fly  1677 ALS------NSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLR 1735

  Fly  1144 ----SLNGIQFRNKCTNKDFDDFKNPLS---NVTCLLMPLSKGSKGLNLIEATHVFLVEPILNPG 1201
                |:..::...........|..|..:   ::..||:....|..||||..|..|..||...||.
  Fly  1736 RHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPM 1800

  Fly  1202 DERQAIGRIHRFGQKRPTKVHRFIVNETIEENILSL----------ITSADDTT--TLSTH--WD 1252
            .:.||:.|.||.|||:...|:|.|...::||.|:.|          :.||::.:  |:.|.  :|
  Fly  1801 KDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASLQTMGTSQIFD 1865

  Fly  1253 LEN 1255
            |.|
  Fly  1866 LFN 1868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7376NP_001261471.1 SNF2_N 221..601 CDD:278600 71/434 (16%)
PHD_SF 281..320 CDD:304600 11/63 (17%)
TPR 636..669 CDD:197478 6/34 (18%)
RING 1037..1083 CDD:238093 6/45 (13%)
HepA <1096..1238 CDD:223627 44/167 (26%)
Helicase_C 1108..1214 CDD:278689 30/119 (25%)
Hel89BNP_001287351.1 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:288874 85/509 (17%)
HEAT repeat 1234..1261 CDD:293787 6/35 (17%)
HEAT repeat 1269..1298 CDD:293787 8/29 (28%)
SNF2_N 1353..1662 CDD:278600 69/375 (18%)
DEXDc 1370..1514 CDD:238005 36/177 (20%)
Helicase_C 1689..1813 CDD:278689 32/123 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467232
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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