DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7376 and Mi-2

DIOPT Version :9

Sequence 1:NP_001261471.1 Gene:CG7376 / 38715 FlyBaseID:FBgn0035689 Length:1270 Species:Drosophila melanogaster
Sequence 2:NP_001014591.1 Gene:Mi-2 / 40170 FlyBaseID:FBgn0262519 Length:1983 Species:Drosophila melanogaster


Alignment Length:1489 Identity:259/1489 - (17%)
Similarity:453/1489 - (30%) Gaps:579/1489 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DEVPPESPEDPTEFRYGKKRWVFK-------------------DNLVEHKEEILICIEKCQNART 56
            ||.....|||....:.||||...|                   .:.|:|.||:.. ....:..|.
  Fly    41 DEDDDYDPEDSRRKKKGKKRKTRKGEEKGRKKKKRKKNESEEDSDFVQHDEEVEY-PSTSKRGRK 104

  Fly    57 RKLKFRSIRQESGSCILVLSHEQ--THVRAREIEMEVGEQVLPLF--FKDFRGSLEFEVAQQEKE 117
            ||.:.::.:::..:...:.|.|.  :......:|:|..|:.|...  :|.|            ..
  Fly   105 RKEEKQAAKEKESASSGMPSVEDVCSAFSVCNVEIEYSEEELQSLTTYKAF------------MH 157

  Fly   118 HKRPL-----KTYVTTKLYDALYEKHRQ----TVHVEQE-------------RSL-----DLPKR 155
            |.||:     ......||...:..|.|:    ..|::||             ||:     :.|:.
  Fly   158 HVRPILQKENPKIAAPKLVMLVAAKWREFCESNPHIQQEGGAAGSGGSAGQARSVTGDEPEEPRS 222

  Fly   156 FQSQLRKYQQRTVSWMLGREQQITQVPANFIVLHAIDGITRVFKHKYCLQFYPFEEEIPKISLPP 220
            .:|...:.........:..|::..:                             ||:.|:     
  Fly   223 SRSSRNEKPDDIYEEAVEEEEEEEE-----------------------------EEKKPR----- 253

  Fly   221 GGILADEMGLGK-------TVEFLAMLLMNPRPQDS------------YRNDYWHQRLEEFSD-- 264
                ....|.||       .|..|.:.|:..|.:||            ..:|...:|:.:.||  
  Fly   254 ----RKRSGRGKKGRRPSGKVPTLKIKLLGKRKRDSSDEEQDASGASERDSDLEFERMLQKSDDS 314

  Fly   265 ----EVPL----------------------------------KRSRISK------------KDEV 279
                |.|:                                  |::::.|            :.:.
  Fly   315 ADEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKIGNKFKKKNKLKKTKNFPEGEDGEHEHQD 379

  Fly   280 FCICTKKHGKRVQCTKCRRWQHEMCM--TISEKSDLPHLCPSCWSELVKSGERLVESGATIIVSP 342
            :|...::.|:.:.|..|.|..|.:|:  .:.|..:....||.|.:          :.||.     
  Fly   380 YCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEA----------DGGAA----- 429

  Fly   343 NAIKMQWFEEIHKHISPSLKVLLYFGLHSTFWVSPFDLAQYDVVLTDYTILRNEIYHTTDFKSDR 407
                                                                         :.:.
  Fly   430 -------------------------------------------------------------EEED 433

  Fly   408 QMRHQQRYMRPNSPLLMVNWWRVCLDEAQMV--ESSTSAAAEMVRMLPAINRWAVTGTIDELPPL 470
            ...||:             :.|||.|..:::  :|..|          |.:.:.:...:|.:|. 
  Fly   434 DDEHQE-------------FCRVCKDGGELLCCDSCPS----------AYHTFCLNPPLDTIPD- 474

  Fly   471 LEFVGR---PEVCRPPDAWQTVDKAFQLNYKCEPLLELLEHSLWR-----------TCK------ 515
                |.   |....||           |..|.|.::      .||           |.|      
  Fly   475 ----GDWRCPRCSCPP-----------LTGKAEKII------TWRWAQRSNDDGPSTSKGSKNSN 518

  Fly   516 SKVE------HELG------IPP-QTEVVHRLELSNVESLYYREEHLKCHEQFLAAVAKHTR--H 565
            |:|.      |.:.      :|. |.:|.|.|.:.:.:..|..||..|..|....|..::.|  .
  Fly   519 SRVREYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQR 583

  Fly   566 NADNSSCLASISPQLL-----RIILKPFLRIRQTCSVPVVFNSNVS---STDYLHPQDLLARLKS 622
            :.|.....|:...::|     :..:||...|.|.     |.|...:   ||.||.....|...||
  Fly   584 HKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQR-----VINHRTARDGSTMYLVKWRELPYDKS 643

  Fly   623 NNENECKTELRTWASSYNGLAAIYFIKNDFPQAIKYYNLLLKLANEYNEQNISVDSVLQIHAIYN 687
            ..|.|        .....||.          |||.||..|..:......|:.|            
  Fly   644 TWEEE--------GDDIQGLR----------QAIDYYQDLRAVCTSETTQSRS------------ 678

  Fly   688 LLQASSLAPAEHKLTELEHKKYQAQMSRLEWKYLEDNTRVLESALSSYNENLEK-VSELEKRFEG 751
                              .|..:.:.|:|:   :||:.   :..:..|....|| .::|:|::| 
  Fly   679 ------------------KKSKKGRKSKLK---VEDDE---DRPVKHYTPPPEKPTTDLKKKYE- 718

  Fly   752 STLDLLATMVNHKTSLHDAIWNKVRDDFFRQNISVERLENVNSMAGMLYFMDIWHNKLQNLKSTL 816
               |..|.:......||.                 .::|.:|      :....|...:    .|:
  Fly   719 ---DQPAFLEGTGMQLHP-----------------YQIEGIN------WLRYSWGQGI----DTI 753

  Fly   817 IAEFEFLKGVMQQACEAIKTGVLLSMEIINFIENVTVCHLTDILDANKDKPVKPKKHRYCR---- 877
            :|:               :.|:..:::.:.|:.::                   .|..:||    
  Fly   754 LAD---------------EMGLGKTIQTVTFLYSL-------------------YKEGHCRGPFL 784

  Fly   878 ----LCLIRDSLNQFE-------CLLFAKKLDEKATVTEGLENPSMEISFIK-----SIFAFLRS 926
                |..:.:...:||       |:.:....|.:|.:.|.      |:||.:     |..:.||:
  Fly   785 VAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIREN------ELSFEEGAIRGSKVSRLRT 843

  Fly   927 KQDFSEWKEECQSKLELLSCLQDLVKFQIKYWIEVEYMVKAFDELEMCK---------------- 975
                      .|.|..:|....:|:.........:::.|...||....|                
  Fly   844 ----------TQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIA 898

  Fly   976 MRILLTDDPEEQSNYRILACQLDEQLQF---NQYN-LQTSQLNFTRLCGRLKYLKHLKEDSADKP 1036
            .::|||..| .|:|..    :|...|.|   :::| ||..|..|..: .:.:.:|.|.|...  |
  Fly   899 YKLLLTGTP-LQNNLE----ELFHLLNFLSRDKFNDLQAFQGEFADV-SKEEQVKRLHEMLG--P 955

  Fly  1037 CPICQTQDDVRYVMMVCGHFVCQHCLDSMRRK-------------NGRAGVTKCPL--------- 1079
            ..:.:.:.||...|.....|:.:..|.:|::|             |.::|...|.|         
  Fly   956 HMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKK 1020

  Fly  1080 -CRQDSPQLYYSVRPGAHKSIIGDFS----TKISSVVELVLK----IKGENEQEKIIVFSQWQAI 1135
             |  :.|.|:.|....|..:..|.:.    ||.:..:.|:.|    :|.:|  .::::|||...:
  Fly  1021 CC--NHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQN--HRVLIFSQMTKM 1081

  Fly  1136 LIEIARALSLNGIQFR---------NKCTNKDFDDFKNPLSNVTCLLMPLSKGSKGLNLIEATHV 1191
            | :|.... |.|.|::         .....:..|.|..|.:.....|:....|..|:||..|..|
  Fly  1082 L-DILEDF-LEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTV 1144

  Fly  1192 FLVEPILNPGDERQAIGRIHRFGQKRPTKVHRFIVNETIEENILSLITSADDTTTLSTH 1250
            .:.:...||.::.||..|.||.||.....::||:...::||.    :|.......:.||
  Fly  1145 IIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEER----VTQVAKRKMMLTH 1199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7376NP_001261471.1 SNF2_N 221..601 CDD:278600 74/494 (15%)
PHD_SF 281..320 CDD:304600 10/40 (25%)
TPR 636..669 CDD:197478 8/32 (25%)
RING 1037..1083 CDD:238093 12/68 (18%)
HepA <1096..1238 CDD:223627 38/158 (24%)
Helicase_C 1108..1214 CDD:278689 29/118 (25%)
Mi-2NP_001014591.1 CHDNT 138..190 CDD:285335 13/63 (21%)
PHD1_CHD_II 380..422 CDD:277006 10/41 (24%)
PHD2_CHD_II 440..482 CDD:277007 11/56 (20%)
CHROMO 490..558 CDD:237991 14/73 (19%)
CHROMO 615..667 CDD:214605 20/74 (27%)
SNF2_N 734..1028 CDD:278600 62/363 (17%)
DEXDc 751..907 CDD:238005 31/205 (15%)
Helicase_C 1053..1167 CDD:278689 29/117 (25%)
DUF1087 <1292..1337 CDD:283996
DUF1086 1380..1517 CDD:283992
CHDCT2 1756..1927 CDD:285336
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467210
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.