DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7376 and Mi-2

DIOPT Version :10

Sequence 1:NP_648034.1 Gene:CG7376 / 38715 FlyBaseID:FBgn0035689 Length:1270 Species:Drosophila melanogaster
Sequence 2:NP_001014591.1 Gene:Mi-2 / 40170 FlyBaseID:FBgn0262519 Length:1983 Species:Drosophila melanogaster


Alignment Length:1489 Identity:259/1489 - (17%)
Similarity:453/1489 - (30%) Gaps:579/1489 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DEVPPESPEDPTEFRYGKKRWVFK-------------------DNLVEHKEEILICIEKCQNART 56
            ||.....|||....:.||||...|                   .:.|:|.||:.. ....:..|.
  Fly    41 DEDDDYDPEDSRRKKKGKKRKTRKGEEKGRKKKKRKKNESEEDSDFVQHDEEVEY-PSTSKRGRK 104

  Fly    57 RKLKFRSIRQESGSCILVLSHEQ--THVRAREIEMEVGEQVLPLF--FKDFRGSLEFEVAQQEKE 117
            ||.:.::.:::..:...:.|.|.  :......:|:|..|:.|...  :|.|            ..
  Fly   105 RKEEKQAAKEKESASSGMPSVEDVCSAFSVCNVEIEYSEEELQSLTTYKAF------------MH 157

  Fly   118 HKRPL-----KTYVTTKLYDALYEKHRQ----TVHVEQE-------------RSL-----DLPKR 155
            |.||:     ......||...:..|.|:    ..|::||             ||:     :.|:.
  Fly   158 HVRPILQKENPKIAAPKLVMLVAAKWREFCESNPHIQQEGGAAGSGGSAGQARSVTGDEPEEPRS 222

  Fly   156 FQSQLRKYQQRTVSWMLGREQQITQVPANFIVLHAIDGITRVFKHKYCLQFYPFEEEIPKISLPP 220
            .:|...:.........:..|::..:                             ||:.|:     
  Fly   223 SRSSRNEKPDDIYEEAVEEEEEEEE-----------------------------EEKKPR----- 253

  Fly   221 GGILADEMGLGK-------TVEFLAMLLMNPRPQDS------------YRNDYWHQRLEEFSD-- 264
                ....|.||       .|..|.:.|:..|.:||            ..:|...:|:.:.||  
  Fly   254 ----RKRSGRGKKGRRPSGKVPTLKIKLLGKRKRDSSDEEQDASGASERDSDLEFERMLQKSDDS 314

  Fly   265 ----EVPL----------------------------------KRSRISK------------KDEV 279
                |.|:                                  |::::.|            :.:.
  Fly   315 ADEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKIGNKFKKKNKLKKTKNFPEGEDGEHEHQD 379

  Fly   280 FCICTKKHGKRVQCTKCRRWQHEMCM--TISEKSDLPHLCPSCWSELVKSGERLVESGATIIVSP 342
            :|...::.|:.:.|..|.|..|.:|:  .:.|..:....||.|.:          :.||.     
  Fly   380 YCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEA----------DGGAA----- 429

  Fly   343 NAIKMQWFEEIHKHISPSLKVLLYFGLHSTFWVSPFDLAQYDVVLTDYTILRNEIYHTTDFKSDR 407
                                                                         :.:.
  Fly   430 -------------------------------------------------------------EEED 433

  Fly   408 QMRHQQRYMRPNSPLLMVNWWRVCLDEAQMV--ESSTSAAAEMVRMLPAINRWAVTGTIDELPPL 470
            ...||:             :.|||.|..:::  :|..|          |.:.:.:...:|.:|. 
  Fly   434 DDEHQE-------------FCRVCKDGGELLCCDSCPS----------AYHTFCLNPPLDTIPD- 474

  Fly   471 LEFVGR---PEVCRPPDAWQTVDKAFQLNYKCEPLLELLEHSLWR-----------TCK------ 515
                |.   |....||           |..|.|.::      .||           |.|      
  Fly   475 ----GDWRCPRCSCPP-----------LTGKAEKII------TWRWAQRSNDDGPSTSKGSKNSN 518

  Fly   516 SKVE------HELG------IPP-QTEVVHRLELSNVESLYYREEHLKCHEQFLAAVAKHTR--H 565
            |:|.      |.:.      :|. |.:|.|.|.:.:.:..|..||..|..|....|..::.|  .
  Fly   519 SRVREYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQR 583

  Fly   566 NADNSSCLASISPQLL-----RIILKPFLRIRQTCSVPVVFNSNVS---STDYLHPQDLLARLKS 622
            :.|.....|:...::|     :..:||...|.|.     |.|...:   ||.||.....|...||
  Fly   584 HKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQR-----VINHRTARDGSTMYLVKWRELPYDKS 643

  Fly   623 NNENECKTELRTWASSYNGLAAIYFIKNDFPQAIKYYNLLLKLANEYNEQNISVDSVLQIHAIYN 687
            ..|.|        .....||.          |||.||..|..:......|:.|            
  Fly   644 TWEEE--------GDDIQGLR----------QAIDYYQDLRAVCTSETTQSRS------------ 678

  Fly   688 LLQASSLAPAEHKLTELEHKKYQAQMSRLEWKYLEDNTRVLESALSSYNENLEK-VSELEKRFEG 751
                              .|..:.:.|:|:   :||:.   :..:..|....|| .::|:|::| 
  Fly   679 ------------------KKSKKGRKSKLK---VEDDE---DRPVKHYTPPPEKPTTDLKKKYE- 718

  Fly   752 STLDLLATMVNHKTSLHDAIWNKVRDDFFRQNISVERLENVNSMAGMLYFMDIWHNKLQNLKSTL 816
               |..|.:......||.                 .::|.:|      :....|...:    .|:
  Fly   719 ---DQPAFLEGTGMQLHP-----------------YQIEGIN------WLRYSWGQGI----DTI 753

  Fly   817 IAEFEFLKGVMQQACEAIKTGVLLSMEIINFIENVTVCHLTDILDANKDKPVKPKKHRYCR---- 877
            :|:               :.|:..:::.:.|:.::                   .|..:||    
  Fly   754 LAD---------------EMGLGKTIQTVTFLYSL-------------------YKEGHCRGPFL 784

  Fly   878 ----LCLIRDSLNQFE-------CLLFAKKLDEKATVTEGLENPSMEISFIK-----SIFAFLRS 926
                |..:.:...:||       |:.:....|.:|.:.|.      |:||.:     |..:.||:
  Fly   785 VAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIREN------ELSFEEGAIRGSKVSRLRT 843

  Fly   927 KQDFSEWKEECQSKLELLSCLQDLVKFQIKYWIEVEYMVKAFDELEMCK---------------- 975
                      .|.|..:|....:|:.........:::.|...||....|                
  Fly   844 ----------TQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIA 898

  Fly   976 MRILLTDDPEEQSNYRILACQLDEQLQF---NQYN-LQTSQLNFTRLCGRLKYLKHLKEDSADKP 1036
            .::|||..| .|:|..    :|...|.|   :::| ||..|..|..: .:.:.:|.|.|...  |
  Fly   899 YKLLLTGTP-LQNNLE----ELFHLLNFLSRDKFNDLQAFQGEFADV-SKEEQVKRLHEMLG--P 955

  Fly  1037 CPICQTQDDVRYVMMVCGHFVCQHCLDSMRRK-------------NGRAGVTKCPL--------- 1079
            ..:.:.:.||...|.....|:.:..|.:|::|             |.::|...|.|         
  Fly   956 HMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKK 1020

  Fly  1080 -CRQDSPQLYYSVRPGAHKSIIGDFS----TKISSVVELVLK----IKGENEQEKIIVFSQWQAI 1135
             |  :.|.|:.|....|..:..|.:.    ||.:..:.|:.|    :|.:|  .::::|||...:
  Fly  1021 CC--NHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQN--HRVLIFSQMTKM 1081

  Fly  1136 LIEIARALSLNGIQFR---------NKCTNKDFDDFKNPLSNVTCLLMPLSKGSKGLNLIEATHV 1191
            | :|.... |.|.|::         .....:..|.|..|.:.....|:....|..|:||..|..|
  Fly  1082 L-DILEDF-LEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTV 1144

  Fly  1192 FLVEPILNPGDERQAIGRIHRFGQKRPTKVHRFIVNETIEENILSLITSADDTTTLSTH 1250
            .:.:...||.::.||..|.||.||.....::||:...::||.    :|.......:.||
  Fly  1145 IIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEER----VTQVAKRKMMLTH 1199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7376NP_648034.1 DEXQc_SHPRH 160..513 CDD:350828 54/441 (12%)
PHD_SF 281..320 CDD:473978 10/40 (25%)
TPR 636..669 CDD:197478 8/32 (25%)
RING_Ubox 1036..1082 CDD:473075 13/68 (19%)
SF2_C_SNF 1104..1225 CDD:350180 34/137 (25%)
Mi-2NP_001014591.1 CHDNT 138..191 CDD:462357 13/64 (20%)
TNG2 <282..422 CDD:227367 20/139 (14%)
PHD1_CHD_II 380..422 CDD:277006 10/41 (24%)
PHD2_CHD_II 440..482 CDD:277007 11/56 (20%)
CD1_tandem_CHD3-4_like 487..557 CDD:349314 15/75 (20%)
CD2_tandem_CHD3-4_like 610..664 CDD:349309 21/76 (28%)
PLN03142 720..>1234 CDD:215601 109/575 (19%)
DUF1087 <1292..1334 CDD:461922
CHDII_SANT-like 1380..1517 CDD:461920
CHDCT2 1757..1902 CDD:462358
Blue background indicates that the domain is not in the aligned region.

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