DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7376 and T05A12.4

DIOPT Version :9

Sequence 1:NP_001261471.1 Gene:CG7376 / 38715 FlyBaseID:FBgn0035689 Length:1270 Species:Drosophila melanogaster
Sequence 2:NP_001023359.1 Gene:T05A12.4 / 177453 WormBaseID:WBGene00020235 Length:1622 Species:Caenorhabditis elegans


Alignment Length:1534 Identity:362/1534 - (23%)
Similarity:578/1534 - (37%) Gaps:458/1534 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 HVRAREIEMEVGEQVLPLFFKDFRGSLEFEVAQQEKEHKRPLKTYVTTKLYDALY-EKHRQTVHV 144
            |:..|:| ::..|:..|.   |.....|.:..:|.::.....:.:.|   |..:| :||...:..
 Worm   159 HILLRDI-IKGDEKETPF---DPNDDNEVDNCEQRRQEDMNFEQFFT---YINVYKDKHDHQIPN 216

  Fly   145 EQERSLDLPKRFQSQLRKYQQRTVSWMLGREQQITQVPANFIVLHAIDG-ITRVFKHK-----YC 203
            .:....||    ...|.:||:.||.|||.||           :.|..|| |..:.|.:     ..
 Worm   217 FKLNESDL----NCDLMQYQKDTVRWMLYRE-----------LNHEPDGNIEWMIKSEKLASDTS 266

  Fly   204 LQFYP-----------FEE--EIPKISLPPGGILADEMGLGKTVEFLAMLLMNPRPQDSYRNDYW 255
            |.:||           .||  :|.|.....|||||||||||||::.|:::..|.:          
 Worm   267 LVYYPSIGAIALNEMTIEERKDIEKRFTLKGGILADEMGLGKTIQALSLIATNRK---------- 321

  Fly   256 HQRLEEF--SDEV---------------------------PLKRSRISKKD-----EVFCICTKK 286
            |.::|.:  |.||                           .:|.:|.::.|     ..||     
 Worm   322 HSKVEIYDESGEVETVNRDESKSTNSSIAQQIKLAESSYAEMKGARQNQADIRYNLNSFC----- 381

  Fly   287 HGKRVQCTKCRRWQHEMCMT----------ISEKSDLPHLCPSCWSELVKSGERLVESGATIIVS 341
            .|:.:.|:.|    .:||..          .:||..    |..|.||  ....|.|  |.|:|:.
 Worm   382 DGETILCSNC----SQMCSAKICGWDFDKFKNEKFQ----CSKCTSE--SENRRAV--GTTLIIL 434

  Fly   342 PNAIKMQWFEEIHKHISPSLKVLLYFGLHSTFWVSPFDLAQYDVVLTDYTILRNEIYHTTDFKSD 406
            |.::..|||.||.||.|.::||:.|||:....::.|.::..|||:||.|..||||:..:.:....
 Worm   435 PESLIFQWFTEISKHCSDNIKVMFYFGIRKHGYLQPCEMDSYDVILTTYDTLRNEMSFSEEKGPP 499

  Fly   407 RQMRHQQRYMRPNSPLLMVNWWRVCLDEAQMVESSTSA-AAEMVRMLPAINRWAVTGT-----ID 465
            |.:|::.:.:...|.|:.|.:||:.:||:|::....|: ...|:..|.|.|.|.||||     |.
 Worm   500 RNLRNESKTLNLTSSLMHVEFWRIIVDESQVLPHGVSSQLTRMLMKLHAENWWCVTGTPLVKSIA 564

  Fly   466 ELPPLLEFV-----GRPEVCRPPDAWQTVDKAFQLNYKCEP----------LLELLEHSLWRTCK 515
            .:.||..|:     |.|:........|.::  |.|:.:.|.          |||:|...:.|..|
 Worm   565 GIYPLFNFLNLFPFGSPQFFSQYVHPQYLN--FALSLRDEALDKNNLPRVFLLEILSKMMSRKTK 627

  Fly   516 SKVEHELGIPPQTEVVHRLELSNVESLYYREEHLKCHEQFLAAVAKHTRHNADNSSCLASISPQL 580
            .....:|.:|..|||...:..:.||...|::|     ::.|..:.:....|||||..|:.:  |.
 Worm   628 QDKSVQLKLPKLTEVEKIIYFTTVEERQYKDE-----KERLRNIVERAIGNADNSDLLSDL--QC 685

  Fly   581 LRIILKPFLRIRQTCSVPVVFNSNVSSTD----YLHPQDLLARLKSNNENECKTELRTWASSYNG 641
            ...:|:....:||.    ::.....:.:|    .|.|:.::.:|..|.:...|...|.:.|...|
 Worm   686 REKVLQELRLLRQI----ILLGQRKTESDKVSCVLAPETVIFKLIKNKKTTIKANFREYLSYSLG 746

  Fly   642 LAAIYFIKNDFPQA---------IKYYNLLL---------------------------------- 663
            :|.:..:. |.||.         |.|..|:|                                  
 Worm   747 VAGVQILM-DMPQTAIETYSSALINYDELILAERNHLPEIKNDSSRDDSPCLLEEDEDDDFDGED 810

  Fly   664 -------KLANEYNEQNISVDSVLQIHAIYNLLQASSLAPA-----------EHKLTELEHKKYQ 710
                   |..|:.||.|..:..:.||...|...:..:|.|.           |.::.|:...| .
 Worm   811 DGSAEKKKKPNKLNELNGFLGGIHQISKKYMKSKNLNLDPTSRKSERNGRVNEREIEEITRPK-D 874

  Fly   711 AQMSRL---EWKYLEDNTRVLESALSSYNE--NLEKV---SELEK----RFEGSTLD------LL 757
            |:.|||   |...:|.|.....:..||..:  |||.|   ..::|    ..|..|:|      |:
 Worm   875 AKRSRLDVEEEDEMETNEEKSNTPCSSTQDEGNLEYVKGQKHIQKLAFAAIEPITIDTTQEVHLI 939

  Fly   758 ATMVNHKTSLHDAIWNKVRDDFFRQ--NISVERLEN------------VNSMAGML-YFMDIWHN 807
            ..|.|.:.|:.           |.|  .:|::||:.            :..:|..| .|..:|..
 Worm   940 LNMYNIQLSMG-----------FPQADRVSLDRLQQIFVRYFQLELRAIEFIANDLPIFSQMWTK 993

  Fly   808 KLQNLKSTLIAEFEFLKGVMQQACEAIK-TGVLLSMEIINFIENVTVCH------LTDILDANKD 865
            ..:||... ::||   .|:|...|.||: ||.|  .|....|.:....|      ...:.|.||.
 Worm   994 DKRNLMYQ-VSEF---FGMMGIRCSAIRDTGAL--YENGKIIRDTVKKHHFPHLPFVALYDTNKL 1052

  Fly   866 KPVKPKKHRYCRLCLIRDSLNQFECLLF------------------AKKLDEKATVTE------- 905
            .|: .:.||. :.|:.|.:....||.:|                  .||:|||....:       
 Worm  1053 TPI-GRVHRE-KTCMGRCNNIVMECEVFNGQPCLSLPDVMSKTLDHFKKIDEKRKELDQKANKLV 1115

  Fly   906 ----GLENPSMEISFIKSIFAFLRSKQDFSEWKEECQSKLELLSCLQDLVKFQIK--------YW 958
                .:.||:|.|    ::|:.....:..|....|.|..|.:|.|...::|..:.        ||
 Worm  1116 EFIMKMANPNMLI----TVFSENTDDRSSSNRTPEIQKMLNVLLCDHKIIKGTLNDKAFVDEYYW 1176

  Fly   959 IEVEYMVKAFDELEMCKM--------------------------------------------RIL 979
            .|...::..|    .||.                                            :.:
 Worm  1177 KEHSCLICDF----WCKTYSFKFDAGFSTYHGLSRNKSGVAEWAVYLANHFAPSKKDAVTFEKRI 1237

  Fly   980 LTDDPEEQSN----YRILACQLDE---------QLQ-----------FNQYN------LQTSQLN 1014
            :|...|:..:    ||::|..|.|         |.|           |:|.:      :.|.::.
 Worm  1238 ITPFFEQIGDVLHAYRLIALTLAEIVDRFDELSQAQRRITDINVSDFFDQNDNIPEPPIATKRIE 1302

  Fly  1015 F---------------TRLCGRLKYLKHLKEDSADK------PCPICQTQDDVRYVMMVCGHFVC 1058
            |               .:....|:||.:|.:...|.      .||||....|. :::..|||.:|
 Worm  1303 FKNHYEAEIKVVIESVRKDVKELRYLMNLMKKQLDGETEDIFDCPICCASIDC-FMVFTCGHRIC 1366

  Fly  1059 QHCLDSMRRKNGRAG----VTKCPLCRQDSPQLYYSVRPGAH---KSIIGD--FSTKISSVVELV 1114
            |:|.:.||....|||    |..||.||..:......|....|   ||.|..  .|.|:|..:.|:
 Worm  1367 QNCFEKMRALQRRAGSAEDVVACPTCRVVNRSKQVMVAQSGHVQDKSAIPGIILSAKMSEAIILM 1431

  Fly  1115 LKIKGENEQEKIIVFSQ--------WQAILIEIARALSLNGIQF----RNKCTNKDFD-DFKNPL 1166
            .:|...:...|||:|:.        |:    .:.:.|.|..:.|    |..|..|.|| |..   
 Worm  1432 REILAADPLNKIILFTTIEQTSTQVWE----YLTKILKLANLPFIAPTRATCGKKVFDFDVS--- 1489

  Fly  1167 SNVTCLLMPLSKGSKGLNLIEATHVFLVEP-----ILNPGDERQAIGRIHRFGQKRPTKVHRFIV 1226
            .:...||..||..:.|||:..|.|:..::|     :||     ||||||:||||||...|:..:|
 Worm  1490 EDTKVLLCSLSLCANGLNMTGANHIIFLDPPHLQSVLN-----QAIGRINRFGQKRDMNVYHLLV 1549

  Fly  1227 NETIEENILSLITSADDTTTLSTHWDLENMTLDSLKKLF 1265
            :.:::   :.|..:|..|.....  :.:..|:..::.:|
 Worm  1550 DGSLD---IELRETAKKTYRRED--EQKGWTIGDIRSMF 1583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7376NP_001261471.1 SNF2_N 221..601 CDD:278600 122/444 (27%)
PHD_SF 281..320 CDD:304600 9/48 (19%)
TPR 636..669 CDD:197478 12/82 (15%)
RING 1037..1083 CDD:238093 21/49 (43%)
HepA <1096..1238 CDD:223627 49/164 (30%)
Helicase_C 1108..1214 CDD:278689 36/123 (29%)
T05A12.4NP_001023359.1 SNF2_N 297..670 CDD:278600 112/406 (28%)
zf-C3HC4_2 1346..1392 CDD:290634 19/46 (41%)
Helicase_C 1425..1537 CDD:278689 36/123 (29%)
HepA <1429..1563 CDD:223627 44/148 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 142 1.000 Domainoid score I2916
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 249 1.000 Inparanoid score I2019
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49298
OrthoDB 1 1.010 - - D110877at33208
OrthoFinder 1 1.000 - - FOG0004218
OrthoInspector 1 1.000 - - oto17641
orthoMCL 1 0.900 - - OOG6_104134
Panther 1 1.100 - - LDO PTHR45865
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3395
SonicParanoid 1 1.000 - - X2964
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.010

Return to query results.
Submit another query.