Sequence 1: | NP_001261471.1 | Gene: | CG7376 / 38715 | FlyBaseID: | FBgn0035689 | Length: | 1270 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491994.2 | Gene: | chd-1 / 172432 | WormBaseID: | WBGene00010369 | Length: | 1461 | Species: | Caenorhabditis elegans |
Alignment Length: | 1365 | Identity: | 234/1365 - (17%) |
---|---|---|---|
Similarity: | 449/1365 - (32%) | Gaps: | 471/1365 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 IADEVPP--ESPEDPTEFRYGKK--RWVFKDNLVEHKEEILICIEKCQNARTRKLKFRSIRQESG 69
Fly 70 SCILVLSHEQTHVRAREIEMEVGEQVLPLFFKDFRGSLEFEVAQQEKEHKRPLKTYVTTKLY--- 131
Fly 132 -----DALYEKHRQTV---------HVEQERSLD--------LPK--RFQS-------------Q 159
Fly 160 LRKYQQRTVSWMLGREQQITQVPANFIVLHAIDGITRVFKHKYCLQFYPFEEEIPKISLPPGGIL 224
Fly 225 ADEMGLGKTVEFLAMLLMNPRPQDSYRNDYWHQRLEEFSDEVPLKRSRISKKDEVFCICTKKHGK 289
Fly 290 RVQCTKCRRWQHEMCMTISEKSDLPHLCPSCWSELVKSGERLVESGATIIVSPNAIKMQWFEEIH 354
Fly 355 KHISPSLKVLLYFG-------LHSTFW-VSPFDLAQYDVVLTDYTILRNEIYHTTDFKSDRQMRH 411
Fly 412 QQRYMRPNSPLLMVNWWRVCLDEAQMVESSTSAAAEMVRMLPAINRWAVTGT-----IDELPPLL 471
Fly 472 EFVGRPEVCRPPDAWQTVDKAF-QLNYK-CEPLLELLEHSLWRTCKSKVEHELGIPPQTEVVHRL 534
Fly 535 ELSNVESLY--------YRE-----------------EHLKCHEQFLAAVAKHTRHNADNSSCLA 574
Fly 575 SISPQLLR-----IILKPFL-RIRQTCSVPVVFNSNVSSTDYLHPQDLLARLKSNN-ENECKTEL 632
Fly 633 RTWA-SSYNGLAAIYFIKNDFPQAIKYYNLLLKLA---------NEYNEQNISVDSVLQIHA--- 684
Fly 685 -----IYNLLQASSLAPAEHKLTELEHKKYQAQMSRLEWKYLEDNTRVLESALSSYNENLEK--- 741
Fly 742 -------VSELEKRFEGS----TLDLLATMVNHKT-SLHDAIW--NKVRDDFFRQNISVERLENV 792
Fly 793 NSMAGMLYFMDIW--------HNK-LQNLKSTLIAEFEFLKGVMQQACEAI-------------- 834
Fly 835 --------KTGVLLSMEIINFIE-----NVTVCHLTDIL-DANKDKPVKPKKHRYCRLCLIRDSL 885
Fly 886 NQFECLLFAKKLD-------------EKATVTEGLENPSMEISF---------IKSIFAFLRSKQ 928
Fly 929 DFSEWKEECQSKLEL-----------LSCLQDLVKFQIKYW------------------------ 958
Fly 959 ------IEVEYMVKAF--DELEMC--KMRILLTDD----PE---------------------EQS 988
Fly 989 NYRILACQL-----DEQLQFNQYNLQTSQ--LNFTRLCGRL-KYLKHLKEDSADKPCPICQTQDD 1045
Fly 1046 VRYVMMVCGHFVCQHCLDSMRRKNGRAGVTK---------CPLCRQDSPQL---YYSVRPGAHKS 1098
Fly 1099 1098 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7376 | NP_001261471.1 | SNF2_N | 221..601 | CDD:278600 | 80/425 (19%) |
PHD_SF | 281..320 | CDD:304600 | 2/38 (5%) | ||
TPR | 636..669 | CDD:197478 | 8/42 (19%) | ||
RING | 1037..1083 | CDD:238093 | 7/54 (13%) | ||
HepA | <1096..1238 | CDD:223627 | 2/3 (67%) | ||
Helicase_C | 1108..1214 | CDD:278689 | |||
chd-1 | NP_491994.2 | CHROMO | <232..276 | CDD:237991 | 10/48 (21%) |
Chromo | 312..362 | CDD:278797 | 8/49 (16%) | ||
SNF2_N | 408..688 | CDD:278600 | 76/435 (17%) | ||
DEXDc | 427..569 | CDD:238005 | 37/248 (15%) | ||
Helicase_C | 710..825 | CDD:278689 | 25/118 (21%) | ||
DUF4208 | 1289..1379 | CDD:290618 | 17/96 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |