DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7376 and shprh

DIOPT Version :9

Sequence 1:NP_001261471.1 Gene:CG7376 / 38715 FlyBaseID:FBgn0035689 Length:1270 Species:Drosophila melanogaster
Sequence 2:XP_031758001.1 Gene:shprh / 101733375 XenbaseID:XB-GENE-959908 Length:1645 Species:Xenopus tropicalis


Alignment Length:1592 Identity:416/1592 - (26%)
Similarity:658/1592 - (41%) Gaps:483/1592 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RWVFKDNLV------EHKEEILI-------CIEKCQ-----NARTRKLKFRSIRQESGSCILVLS 76
            ||:.|..|:      ....:|.:       |:.|.:     |.|.:|           :|||:  
 Frog   183 RWLQKKKLIALYYRSAKSSDIEVGIYLLEACLSKPEFLSQGNGRMKK-----------ACILM-- 234

  Fly    77 HEQTHVRAREIEMEVGEQVLPLFFKDFRGSLEFEVAQQEKEHKRPLKTYVTTKLYDALYEKHRQT 141
                            ::::..|: :|  ::...:...|:|..|.|:.....:|||.:.:.|:|.
 Frog   235 ----------------QRLMETFY-NF--TIPDVIDDNEEESDRELERQNIEELYDYVRQTHQQE 280

  Fly   142 VHVEQERSLDLPKRFQSQLRKYQQRTVSWMLGREQQITQVPANFIVLHAI-DGITRVFKHKYCLQ 205
            .::.|: .:..|... ..||.||...|:|||.:| ...:||:....||.: ..::.:.:.|  :.
 Frog   281 GNLLQQ-DVQHPALI-PVLRPYQNEAVNWMLQKE-NFMEVPSTENTLHPLWREVSTLEEVK--IY 340

  Fly   206 FYPF------EEEIPKISLPPGGILADEMGLGKTVEFLAMLLMNPR------------------- 245
            :.||      |..:|.... ||||||||||||||||.|:::|.:||                   
 Frog   341 YNPFTGCVIRERPVPGHEW-PGGILADEMGLGKTVEVLSLILCHPRKDVRKDVLTLPEGKLVNYF 404

  Fly   246 ----PQDSYRN------------------------------------------------------ 252
                |..|.||                                                      
 Frog   405 IPPPPMKSARNKKEKVADFKSKERIQFPSLRVMILAAIKEISVKKGASIIAIFKYISTIYRYDVQ 469

  Fly   253 ----------------------------------------------------------------- 252
                                                                             
 Frog   470 RNRRLLKRTIEKLISEKIVEQVKGHGLAGSFKLGKNYKENKIQDKSQKLKTKSSKRLQHSLSELR 534

  Fly   253 --------------------DYWHQRLE-----EFSDEVPLKRSRISK-------KDE------- 278
                                ||..|..|     |..|:..:|...:||       |.|       
 Frog   535 DHEKEQPEKVKCIHAAAKDHDYCTQHKESTTDTELKDKGEVKERNVSKLNASLETKHENVYADHP 599

  Fly   279 -----------VF----------CICTK----KHGKRVQCTKCRRWQHEMCMTISEKS--DLPHL 316
                       ||          |||.:    .:..||||.:|..|||..|:...:::  ..|..
 Frog   600 HSQEQVCQTGAVFPFNTADYRFECICGELGLYDYKARVQCLQCHLWQHAECVNYKQENLGVTPFY 664

  Fly   317 CPSCWSELVKSGERLVESGATIIVSPNAIKMQWFEEIHKHI-SPSLKVLLYFGLHSTFWVSPFDL 380
            ||.|...:     :.|.:|||:|:||::|..||.:||::|: |.||.|::|.|:....::.|..|
 Frog   665 CPHCLVAM-----KPVPTGATLIISPSSICHQWVDEINRHVQSSSLHVMVYQGVKKHGFLQPQML 724

  Fly   381 AQYDVVLTDYTILRNEIYHT----TDFKSDRQMRHQQRYMRPNSPLLMVNWWRVCLDEAQMVESS 441
            |:.|||:|.|.:||:|:.:.    ::.:..|:.|:|:|||...|||:.|.|||:|||||||||.:
 Frog   725 AEQDVVITTYDVLRSELNYVDIPHSNSEDGRKFRNQKRYMAVPSPLVAVEWWRICLDEAQMVECT 789

  Fly   442 TSAAAEMVRMLPAINRWAVTGT-----IDELPPLLEFVGRPEVCRPPDAWQTVDKAF------QL 495
            |:.||||...|..||||.|:||     :::|..|:.|:|             ||..:      ||
 Frog   790 TAKAAEMALRLSGINRWCVSGTPVQRGLEDLFGLVLFLG-------------VDPYWVKHWWDQL 841

  Fly   496 NYK--CE----PLLELLEHSLWRTCKSKVEHELGIPPQTEVVHRLELSNVESLYYREEHLKCHEQ 554
            .||  |.    ||.:.:...:||:.|..|..::.||||||.||.|..|.||..:|..:|..|.:.
 Frog   842 LYKPYCRKDPFPLYKFISKIMWRSAKKDVLDQIQIPPQTEDVHWLHFSPVERHFYHRQHEVCCQD 906

  Fly   555 FLAAVAKHTRHNADNSSCLASISPQLLRIILKPFLRIRQTCSVPVVFNSNV----SSTDYLHPQD 615
            .||...|.|    |.:..|:|:..:.:..||.|.||:||.|..|.......    .||  :..::
 Frog   907 ALAKFRKIT----DWALKLSSLDRRTVSSILYPLLRLRQACCHPQAVRGEFLPLQKST--MTMEE 965

  Fly   616 LLARLKSNNENECKTELRTWASSYNGLAAIYFIKNDFPQAIKYYNLLLKLANEYNEQNISVDSVL 680
            ||..|:.....||:...|....:.||||.|:.||.::|:|.:.|..:|:.:.|:.|: :..||:.
 Frog   966 LLTSLQKKCRTECEEAHRQLVCALNGLAGIHIIKGEYPEATELYREVLRSSEEHKEK-LKTDSLQ 1029

  Fly   681 QIHAIYNLLQASSLAPAEHK--LTELEHKKYQAQMSRLEWKYLEDNTRVLESALSSYNENLEKVS 743
            ::|:.:||::   |..|:|.  ...|...|...:..:|:..|:..:...:.....:....|:.:.
 Frog  1030 RLHSTHNLME---LLAAKHPGIPPTLRDDKLADETKQLKEHYMSKSNAEVSEGHQALQPVLQSIR 1091

  Fly   744 ELEKRFEGST---LDLLATMVNH--KTSLHDAIWNKVRDDFFRQNISVERLENVNSMAGMLYFMD 803
            ||:::...|:   ||::...|.:  ...|...:.|::...:..|...:...:......|:.|.  
 Frog  1092 ELQRKIHFSSPWWLDVIQCAVQYAIDEELVQRVQNELTSIYKHQTNKLSMADKFRDCRGLQYI-- 1154

  Fly   804 IWHNKLQNLKSTLIAEFEFLKGVMQQACEAIKTGVLL----SMEIINFIENVTVCHLTDILDANK 864
                        :..:.|.||...:...:|:|.   |    |.|:   |:..|:|||        
 Frog  1155 ------------VTTQMEELKKCQKLVRDAVKN---LEGPPSQEV---IQASTICHL-------- 1193

  Fly   865 DKPVK-PKKHRYCRLCLIRDSLNQFECLLFAKKL------------DEKATVTEGLENPS----- 911
             :|.: |..:  |..|...:...::|..|||..:            ||:..|.:.|...|     
 Frog  1194 -RPARLPLNN--CVFCKADELFTEYESKLFAHTVKGQTAIFEEMIEDEEGLVDDRLPTTSRGLWA 1255

  Fly   912 ---MEISFIKSIFAFLRS-KQD-------------FSEWKEECQSKLELLSCLQDLVKFQIKYWI 959
               :|.| :|::.:|.|: :.|             |..||:|              .|...:||:
 Frog  1256 ASELERS-LKAVLSFARTHRMDARVIDEGAIFMELFDSWKKE--------------YKLLHEYWM 1305

  Fly   960 EVEYMVKAFDELEMC--KMRILLTDDPE--------------EQSNYRILACQLDEQLQFNQYNL 1008
            .:...|.|.|||.|.  ::|:.|.|:|:              :|:..::|          |...:
 Frog  1306 VLRDHVSAIDELAMATERLRVRLPDEPKPNPPVLHIIEPHEVDQNRVKLL----------NDKAV 1360

  Fly  1009 QTSQLNFTRLCGRLKYLKHLKEDSAD--------KPCPICQTQDDVRYVMMVCGHFVCQHC---- 1061
            ..|||.  :..|:|.||.:| |.|.|        :|||||......::.::.|||..|..|    
 Frog  1361 AKSQLQ--KKLGQLLYLTNL-EKSQDQTTGGVNPEPCPICARHLGKQWAVLTCGHCFCNECVAII 1422

  Fly  1062 LDSMRRKNGRAGVTKCPLCRQDSPQ---LYYSVRPGAHKS----IIGDFSTKISSVVELVLKIKG 1119
            :|.......|:.: ||.:|||.:..   .|.....||::.    :.|..|||:.:||..::||:.
 Frog  1423 VDQYSVGTRRSAI-KCAICRQTTSHKEISYVFTSEGANQEQDIPVKGSHSTKVEAVVRTLIKIQT 1486

  Fly  1120 ENEQEKIIVFSQWQAILIEIARAL--------SLNGI-QFRNKCTNKDFDDFKNPLSNVTCLLMP 1175
            ::...|.:|||.||.:|..||:||        .:||| :|:...:...:|    |..|:  ||:|
 Frog  1487 QDPGAKSLVFSTWQDVLDIIAKALQDNNLVFSQINGIHKFQENLSAFKYD----PKINI--LLLP 1545

  Fly  1176 LSKGSKGLNLIEATHVFLVEPILNPGDERQAIGRIHRFGQKRPTKVHRFIVNETIEENILSLITS 1240
            |..||.|||:||||||.||||||||..|.|||||:||.||.:.|.||||::..||||.:.::|.:
 Frog  1546 LHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKSTIVHRFLIKATIEERMQAMIKT 1610

  Fly  1241 AD--DTTTLSTHWDLENMTLDSLKKLFILKEE 1270
            ||  .|:|.....:...:|:..|.:||..:.|
 Frog  1611 ADRSHTSTSMKQSETSALTVADLAELFTEERE 1642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7376NP_001261471.1 SNF2_N 221..601 CDD:278600 165/609 (27%)
PHD_SF 281..320 CDD:304600 15/44 (34%)
TPR 636..669 CDD:197478 11/32 (34%)
RING 1037..1083 CDD:238093 15/49 (31%)
HepA <1096..1238 CDD:223627 68/154 (44%)
Helicase_C 1108..1214 CDD:278689 53/114 (46%)
shprhXP_031758001.1 DEAD-like_helicase_N 297..>418 CDD:421690 42/124 (34%)
DEAD-like_helicase_N 297..>380 CDD:421690 35/86 (41%)
Linker_histone 432..503 CDD:395429 0/70 (0%)
PHD_SHPRH 622..668 CDD:277022 15/45 (33%)
DEXQc_SHPRH <664..865 CDD:350828 82/218 (38%)
RING-HC_SHPRH 1391..1441 CDD:319483 14/50 (28%)
SF2_C_SNF 1470..1595 CDD:350180 62/130 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 255 1.000 Domainoid score I2016
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6489
Inparanoid 1 1.050 415 1.000 Inparanoid score I1788
OMA 1 1.010 - - QHG49298
OrthoDB 1 1.010 - - D110877at33208
OrthoFinder 1 1.000 - - FOG0004218
OrthoInspector 1 1.000 - - oto104687
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2964
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.980

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