DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fmt and Ppp6r2

DIOPT Version :9

Sequence 1:NP_001261470.1 Gene:fmt / 38714 FlyBaseID:FBgn0035688 Length:996 Species:Drosophila melanogaster
Sequence 2:XP_006521461.1 Gene:Ppp6r2 / 71474 MGIID:1918724 Length:978 Species:Mus musculus


Alignment Length:1142 Identity:278/1142 - (24%)
Similarity:432/1142 - (37%) Gaps:343/1142 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFWDKGYAPSANIEALLEKENSTLEEFLDEEDILQECKTQKKNLVNYFTRPEVIRRLVELITTEP 65
            |||......:::::.||:||:.||:|.:||:|||||||.|.:.|:::..|.:.:..||.|||.:|
Mouse     1 MFWKFDLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVNLITQDP 65

  Fly    66 SEDVPMSKRFRYANMSCEILTLGLPSLDEKLLNDAETLQLLYSYLEKEPPLNPLLSSFFSKTFSM 130
            .:|:....||:|.|.:||:||..:|.:.::|..|...|.|||.:|::||||||||:||||||...
Mouse    66 PQDMEEKVRFKYPNTACELLTCDVPQISDRLGEDESLLNLLYDFLDQEPPLNPLLASFFSKTIGN 130

  Fly   131 LFTKKPEQDWFLYQHMCLQLLEYIKSQKTFLDFICKHFDTPVIPDLIMQMMKDIEGGRLKRNLFE 195
            |..:|.|           |::.::|.::.|:..:.||..|..:.||:::::..:|...|::.:..
Mouse   131 LIARKTE-----------QVIMFLKKKEKFISQLLKHIGTSALMDLLLRLVSCVEPVGLRQEVLH 184

  Fly   196 WLTEDKIVERLIAILRNPQETD----------------------------KHANVADFFCDLINQ 232
            ||.|:||::|::|::...|:.|                            :.:|.:...||:|..
Mouse   185 WLNEEKIIQRIVALIHPHQDEDVSAMLTEPTFLHGHTHPGSWKTCCCVKGRQSNASQALCDIIRL 249

  Fly   233 GRLMRQTEQENDSFEPAFDGSNPILKTIEFADTIEALLNVILEPNAQESAILSGISVVLTLIKPI 297
            ||  .|..|..::.||     :|:|.|:|..|.:|.||..:.:.:..||.::||:.|:|.|::|.
Mouse   250 GR--DQGSQLQETVEP-----DPLLITLESQDCVEQLLKNMFDGDQTESCLVSGMQVLLALLEPR 307

  Fly   298 TFTDEPNSDRQRLLQKREREIHQEVQETVITVMAPRLQEFVHILKNPPAKPTLETTAAVLTPPFG 362
            ....|...|  ...|..||.  ..|..:::..:.|.|:.|..:|.|||.|..:.||..||..|.|
Mouse   308 RVGTEGLVD--SFSQGLERS--HSVSSSILRGIEPWLKNFHQLLLNPPKKKAILTTIGVLEEPLG 368

  Fly   363 KTRLQVCRVFTALLETKHETIQQAICATEYFSLLLDFFKQYCWNNFLHTEMEKALYVVFYNELSN 427
            ..||...|:..|||.|....|.|.:|......||||.|.:|.||||||.::|..:..:.      
Mouse   369 NARLHGARLMAALLHTNTPGINQELCRLNTMDLLLDLFFKYTWNNFLHLQVELCIAAIL------ 427

  Fly   428 NNTASTEVTDYFTADCLINAFLKVGTEESEVEMKNALNDAKRAEGGKDEEGGDIEIEVAAAQEVA 492
                                                                             
Mouse   428 ----------------------------------------------------------------- 427

  Fly   493 AQTPDERQTAAEENQEHEEHMSQVEAAAEATASEDAEPKAQDNEVKNSEVDGESPTDQQESEATL 557
                                       :.|...|.||....|.:|:..:..|:..          
Mouse   428 ---------------------------SHAAREEQAEASGSDGKVEPLQGSGDGN---------- 455

  Fly   558 NDLDKTKTVPSPPPSEMQSHLIVNCHLISKLVDLWQHNAQAQSAEKGRRLGYMGHLIKILRHITN 622
            ..|:.|.::.|||.:.|.:||...|.|:.::::.|:.|...|:| .|.|.|.||||.:|...:..
Mouse   456 GKLETTPSITSPPENTMVTHLFQKCCLVQRILEAWEANDHTQAA-GGMRRGNMGHLTRIANAVVQ 519

  Fly   623 CISE---SEHIGDLIT------------------------------------SSLSDED------ 642
            .:.:   ..||.::|.                                    ||..|||      
Mouse   520 NLEQGPVQAHISEVIRGLPADCRGRWESFVEETLMETNRRNTVDLVSTHHLHSSSEDEDIEGTFP 584

  Fly   643 -EVKLWQSLIDAETGEFSLAVKQQTKLLADCNPHEENQYNDGSNDYTGEINAWNVGNLPYREVDC 706
             |:.|.|:..:.:       ::|.|....|.....:.::.|..::    |||      |:..:  
Mouse   585 NELSLQQAFSEYQ-------IQQMTANFVDQFGFNDEEFADQDDN----INA------PFDRI-- 630

  Fly   707 SELNNTLQ--------DIFFAIDQNRFQ-FGRNIDDEDDD---DDEHG------DHSGGGDGHGH 753
            :|:|..::        .:|.|...:|.| |.   |||::|   |||..      ..:..|..|..
Mouse   631 AEINFNIEADEDSPSAALFEACCSDRIQPFD---DDEEEDIWEDDETRCAARVMARARFGAPHVS 692

  Fly   754 GMFTKN---------------SNTLNNLADPWDIQFAVLSSAPTQVNTGTANWGTDFNSDN---- 799
            ..::||               :..:..||.|         |:|||..      |....||:    
Mouse   693 DNYSKNALEHGGQDRKTGSAVARNVPGLAAP---------SSPTQKE------GPRSESDSAGTT 742

  Fly   800 -FADFDAHFSTFGSDLGMPISAPPGEEEEEDSSPAPESATQVNPE--EER--------QP--AES 851
             .|.||...:        |:||.||...:..|     ||....|.  ||:        ||  ...
Mouse   743 WTAVFDEPVN--------PLSATPGAARDVGS-----SAWAAGPSVVEEKGWAKFTDFQPFCCSE 794

  Fly   852 IGLAVGKGVQDNLACTDDQQAEYDNNANVEKAISDKLAESSVVETAAIVTRLQSVLL-----DGE 911
            .|......|.     .|...||...:...||.    ...:|.......|||...::.     .|.
Mouse   795 TGPRCSSPVD-----MDHSNAEGGQSPGPEKT----FGPTSPCAWNVCVTRKAPLVASDSSSSGG 850

  Fly   912 DDYEDDEGMWTKPLGA-------------DRPSETEQITPISNGPDSKVNELGLP------FSNH 957
            .|.||||    |..||             ..|...|.....:..|||.|.....|      .|..
Mouse   851 SDSEDDE----KAAGAVEAVCTGHTGKVSPPPRTAEAAVGRAECPDSTVLAPACPAPSEVTISPA 911

  Fly   958 ANDISSNNVDGHEANITTEQQKLAAAAKTNNVEIATT 994
            ...|:.:......|.|.. ...:|||.....:...||
Mouse   912 VATIAPSKAGSPTATIVV-SSSVAAAVPPGPIVAVTT 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fmtNP_001261470.1 SAPS 129..465 CDD:282368 91/363 (25%)
Ppp6r2XP_006521461.1 SAPS 128..562 CDD:367965 123/564 (22%)
PHA03247 <721..977 CDD:223021 61/269 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839509
Domainoid 1 1.000 134 1.000 Domainoid score I4983
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 337 1.000 Inparanoid score I2369
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000781
OrthoInspector 1 1.000 - - otm42546
orthoMCL 1 0.900 - - OOG6_100938
Panther 1 1.100 - - LDO PTHR12634
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R385
SonicParanoid 1 1.000 - - X542
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.920

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