DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fmt and Ppp6r1

DIOPT Version :9

Sequence 1:NP_001261470.1 Gene:fmt / 38714 FlyBaseID:FBgn0035688 Length:996 Species:Drosophila melanogaster
Sequence 2:NP_766482.2 Gene:Ppp6r1 / 243819 MGIID:2442163 Length:856 Species:Mus musculus


Alignment Length:1065 Identity:245/1065 - (23%)
Similarity:398/1065 - (37%) Gaps:314/1065 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFWDKGYAPSANIEALLEKENSTLEEFLDEEDILQECKTQKKNLVNYFTRPEVIRRLVELITTEP 65
            |||......|::::.|||||:.:|.|.|||||:|||||...:.|:::..:|..::.:|..:|.||
Mouse     1 MFWKFDLHTSSHLDTLLEKEDLSLPELLDEEDVLQECKVVNRKLLDFLLQPSHLQAMVAWVTQEP 65

  Fly    66 SEDVPMSKRFRYANMSCEILTLGLPSLDEKLLNDAETLQLLYSYLEKEPPLNPLLSSFFSKTFSM 130
            ........|::|.:::|||||..:|.:::.|..|...|..||.:|:....|||||:|||||...:
Mouse    66 PASGEERLRYKYPSVACEILTSDVPQINDALGADESLLNRLYGFLQSGDSLNPLLASFFSKVMGI 130

  Fly   131 LFTKKPEQDWFLYQHMCLQLLEYIKSQKTFLDFICKHFDTPVIPDLIMQMMKDIEGGRLKRNLFE 195
            |..:|.:           ||:.:::.:..|:|.:.:|..|..|.||:::::..:|..:|::::|.
Mouse   131 LINRKTD-----------QLVSFLRKKDDFVDLLLRHIGTSAIMDLLLRLLTCVERPQLRQDVFN 184

  Fly   196 WLTEDKIVERLIAILRNPQETDKHANVADFFCDLINQGRLMRQTEQENDSFEPAFDGSNPILKTI 260
            ||.|:|||:|||..:...::.::|:|.:...||:|...|  .|..|..||.||     :.:|.|:
Mouse   185 WLNEEKIVQRLIEQIHPSKDDNQHSNASQSLCDIIRLSR--EQMIQGQDSPEP-----DQLLATL 242

  Fly   261 EFADTIEALLNVILEPNAQESAILSGISVVLTLIKPITFTDEPNSD---RQRLLQKREREIHQEV 322
            |..:|||.||:.:.|....:|.|:|||.|:|||::|    ..|.||   ........:.::....
Mouse   243 EKQETIEQLLSNMFEGEQCQSVIVSGIQVLLTLLEP----RRPRSDSVTMNNFFSSVDGQLELLA 303

  Fly   323 QETV---------ITVMAPRLQEFVHILKNPPAKPTLETTAAVLTPPFGKTRLQVCRVFTALLET 378
            |..:         :..:.|||..|..:|..||....|:.|...|.||.|.|||.|.::..:.|..
Mouse   304 QGALDDALSSMGALHALRPRLDRFHQLLLEPPKLEPLQMTWGSLAPPLGNTRLHVVKLLASALSA 368

  Fly   379 KHETIQQAICATEYFSLLLDFFKQYCWNNFLHTEMEKALYVVFYNELSNNNTASTEVTDYFTADC 443
            ....:.|.:...:..:.|||.|..|.:|||||                                 
Mouse   369 NAAALTQELLVLDVPNTLLDLFFHYVFNNFLH--------------------------------- 400

  Fly   444 LINAFLKVGTEESEVEMKNALNDAKRAEGGKDEEGGDIEIEVAAAQEVAAQTPDERQTAAEENQE 508
                                                                             
Mouse   401 ----------------------------------------------------------------- 400

  Fly   509 HEEHMSQVEAAAEATASEDAEPKAQDNEVKNSEVDGESPTDQQESEATLNDLDKTKTVPSPPPSE 573
                 :|||....|..|....|            |..|.|                    |.|:.
Mouse   401 -----AQVEVCVSAMLSSGPPP------------DSSSET--------------------PVPNP 428

  Fly   574 MQSHLIVNCHLISKLVDLWQHNAQAQSAEKGRRLGYMGHLIKILRHITNCISE---SEHIGDLIT 635
            :..||:.:|.|:.:::..|:.|.:.||. .|.|.||||||.::...:.....:   :|.:|.|: 
Mouse   429 IVKHLLQHCRLVERILASWEENDRVQSG-GGPRKGYMGHLTRVANAVVQNAEQGPNAEQLGQLL- 491

  Fly   636 SSLSDEDEVKLWQSLIDAETGEFSLAVKQQTKLLADCNPHEENQYNDGSNDYTGEINAWNVGNL- 699
            ..|.:|.:.: |::.:.....|.:   |:.|..|.  |.|..:..:|..:|...|.|......| 
Mouse   492 KELPEEQQQR-WEAFVSGPLAETN---KKNTVDLV--NTHHLHSSSDDEDDRLKEFNFPEEAVLQ 550

  Fly   700 -PYREVDCSELNNTLQDIFFAIDQN----------------RFQFGRNIDDE------------- 734
             .:.:.....:.:...|.|...|:.                ...|..|.|||             
Mouse   551 QAFMDFQMQRMTSAFIDHFGFNDEEFGEQEESVNAPFDKTANITFSLNADDENPNANLLEICYKD 615

  Fly   735 -----DDDDDEHGDHSGGGDGHGHGMFTKNSNTLNNLADPWDIQFAVLSSAPTQVNTG--TANWG 792
                 ||:::|..:..|..:..|.....:.|..:.          |..:|.|..|.:|  |.:..
Mouse   616 RIQQFDDEEEEEEEGQGSAESDGEYGAWQGSQPVR----------ASQASQPPGVRSGGSTDSEE 670

  Fly   793 TDFNSDNFADFDAHFSTFG----SDLGMPISAPPGE-------------------EEEED----- 829
            .|...|...|..|..:..|    |....|.:.|||.                   .:|.|     
Mouse   671 EDEEEDEEEDEGAEQAACGRTSPSSFPSPSTQPPGPSWTATFDTVPMDAPTGPPVSKEADMSSIQ 735

  Fly   830 --SSPAPESATQVNPEEERQPAESIGLAVGKGVQDNLACTDDQQAEYDNNANVEKAISDKLAES- 891
              |||....:.|:..::...|                            :|..|...|.|:||. 
Mouse   736 IPSSPPAHGSPQLRSQDPTHP----------------------------SAPQEVTDSSKVAEPL 772

  Fly   892 SVVETAAIVTRLQSVLLDGEDDYEDDEGMWTKPLGADRPSETEQITPISNGPDSKVNE------- 949
            :..:....|..:|:.|          .||.:.|...|  |.|..  |.::.||.|.::       
Mouse   773 APCQALVSVADVQATL----------HGMRSAPSSLD--SATRD--PSTSVPDFKAHQSPQTMEG 823

  Fly   950 ------LGLPFSNHANDISSNNVDG 968
                  ||||.|..|.::.:.:..|
Mouse   824 KRSPEHLGLPQSQSALEMPNGSTPG 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fmtNP_001261470.1 SAPS 129..465 CDD:282368 87/347 (25%)
Ppp6r1NP_766482.2 Interaction with PPP6C. /evidence=ECO:0000250 10..403 135/517 (26%)
SAPS 128..519 CDD:367965 122/553 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 621..770 33/186 (18%)
PHA03247 <719..847 CDD:223021 32/169 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 792..856 15/61 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839510
Domainoid 1 1.000 134 1.000 Domainoid score I4983
eggNOG 1 0.900 - - E1_KOG2073
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 337 1.000 Inparanoid score I2369
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000781
OrthoInspector 1 1.000 - - otm42546
orthoMCL 1 0.900 - - OOG6_100938
Panther 1 1.100 - - O PTHR12634
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R385
SonicParanoid 1 1.000 - - X542
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.780

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