DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fmt and ppp6r2

DIOPT Version :9

Sequence 1:NP_001261470.1 Gene:fmt / 38714 FlyBaseID:FBgn0035688 Length:996 Species:Drosophila melanogaster
Sequence 2:XP_012815510.2 Gene:ppp6r2 / 100125053 XenbaseID:XB-GENE-5904142 Length:954 Species:Xenopus tropicalis


Alignment Length:1121 Identity:276/1121 - (24%)
Similarity:462/1121 - (41%) Gaps:326/1121 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFWDKGYAPSANIEALLEKENSTLEEFLDEEDILQECKTQKKNLVNYFTRPEVIRRLVELITTEP 65
            |||......:::::.||:||:.||:|.::|:|:|||||.|.:.|:::..:.:.:.:||||||.:|
 Frog     1 MFWKFDLNTTSHVDKLLDKEDVTLQELMEEDDLLQECKAQNRRLLDFICQQQCMEQLVELITQKP 65

  Fly    66 SEDVPMSKRFRYANMSCEILTLGLPSLDEKLLNDAETLQLLYSYLEKEPPLNPLLSSFFSKTFSM 130
            .:|:....||::.|.:||:||..:|.:::||..|...|.:||.:|.:||||||||:||||||...
 Frog    66 PDDMEEKVRFKFPNTACELLTCDVPQINDKLGEDDNLLNILYDFLRQEPPLNPLLASFFSKTIGN 130

  Fly   131 LFTKKPEQDWFLYQHMCLQLLEYIKSQKTFLDFICKHFDTPVIPDLIMQMMKDIEGGRLKRNLFE 195
            |..:|.|           |::.:::.::.||..:.:|..|..:.||:::::..:|...|::.:..
 Frog   131 LIARKTE-----------QVIGFLRKKEKFLALVLEHIGTSAMMDLLLRLISCVEPAPLRQEVLH 184

  Fly   196 WLTEDKIVERLIAILRNPQETDKH------ANVADFFCDLINQGRLMR-QTEQENDSFEPAFDGS 253
            ||.|:::::|||.::.:.|:.|.|      :|.:...||||   ||.| |..|..::.|     :
 Frog   185 WLNEERLIQRLINLIHHSQDEDYHDSLQKQSNASQTLCDLI---RLSRDQCNQMQETME-----T 241

  Fly   254 NPILKTIEFADTIEALLNVILEPNAQESAILSGISVVLTLIKPITFTDEP--NSDRQRLLQKRER 316
            :|:|.|:|....:|.||..:.:....||.|:||..::|||::....:.:|  ||    |.|..:|
 Frog   242 DPLLATLESQPCVEQLLKNMFDGEQTESCIVSGTQILLTLLETRRQSVDPLLNS----LTQGYDR 302

  Fly   317 EIHQEVQETVITVMAPRLQEFVHILKNPPAKPTLETTAAVLTPPFGKTRLQVCRVFTALLETKHE 381
            .  ..|...::.|:.|||::|..:|::||.|.::.||..||..|.|..||...|:..|||.|...
 Frog   303 T--PTVSNCILQVIEPRLKDFHDLLQHPPKKESILTTIGVLEEPLGNARLHTTRLIAALLHTNTP 365

  Fly   382 TIQQAICATEYFSLLLDFFKQYCWNNFLHTEMEKALYVVFYNELSNNNTASTEVTDYFTADCLIN 446
            :|.|.:|......||||.|.:|.||||:|.::|..:..|    |||:                  
 Frog   366 SINQELCRLGTMDLLLDLFFRYTWNNFMHLQVELCIAAV----LSNS------------------ 408

  Fly   447 AFLKVGTEESEVEMKNALNDAKRAEGGKDEEGGDIEIEVAAAQEVAAQTPDERQTAAEENQEHEE 511
                                  |.||                         :....:||.||.||
 Frog   409 ----------------------RQEG-------------------------KYLAVSEERQEEEE 426

  Fly   512 HMSQVEAAAEATASEDAEPKAQDNEVKNSEVDGESPTDQQESEATLNDLDKTKTVPSPPPSEMQS 576
                       |.:.:|| ..::.::.:||.:               ||             |.:
 Frog   427 -----------TLNGNAE-NMENCQICSSEHE---------------DL-------------MIT 451

  Fly   577 HLIVNCHLISKLVDLWQHNAQAQSAEKGRRLGYMGHLIKILRHITNCISE---SEHIGDLITSSL 638
            ||...|.|:.:::|.|:.|.:.| ||.|.|.|.||||.:|...:...:.:   ...|.|.|| .|
 Frog   452 HLFQKCCLVQRILDAWETNDRIQ-AEGGMRRGNMGHLTRIANTVVQNMEKGPMQAQISDFIT-EL 514

  Fly   639 SDEDEVKLWQSLIDAETGEFSLAVKQQTKLLADC------NPHEENQYNDGSNDYTGEINAWN-- 695
            .|:...: |:|.::....|.:   ::.|..|.:.      :.|..::..|..|.:..|::...  
 Frog   515 PDDCRGR-WESFVEETLTETN---RRNTVDLVNMIWVSTHHLHSSSEDEDIDNAFPNELSVQQAF 575

  Fly   696 ------------VGNLPYREVDCSELNNTLQDIFFAIDQNRFQFGRNIDDEDD------------ 736
                        |....:.:.:.:|.::.:...|..|.:..|    ||:.|||            
 Frog   576 SDYQIQQMTANFVDQFGFNDEEFAEQDDHINAPFDRITEINF----NIEAEDDNPNAALFEACCN 636

  Fly   737 ------DDDEHGDHSGGGDGHGHGMFTKNSNTLNNLADPW---DIQFAVLSSAPTQVNTGTANWG 792
                  ||:|.                          |.|   :|.:.      |||.:.| .:|
 Frog   637 ERIQQFDDEEE--------------------------DIWEEKEIGYG------TQVKSRT-RFG 668

  Fly   793 TDFNSDNFADFDAHFSTFGSDL--GMPISAPPGEEEEED----------------------SSPA 833
            ...:|::         :..|||  |.|..:|..:|:|::                      .|..
 Frog   669 VSQSSED---------SSRSDLENGEPTGSPVSDEDEDEEGHSIETPQAANLITCSQSMQRDSVV 724

  Fly   834 PESA--------TQV--NPEEERQPAESIGLAVGKGV---------------------------- 860
            ||.|        |.|  .|...:.||..:.|.||..|                            
 Frog   725 PEGAVSPYKTGWTAVFDEPVNSKPPAPCVALDVGSNVWEAPITETSTSEQKGWAKFPDFQPFCCS 789

  Fly   861 QDNLACTDDQQAEYDNNANVEKAISDKL--AESSVVETAAIVTRLQSVLLD-----GED-DYEDD 917
            :....|:.....|..::....|...|||  |.|..|....:..:..::..|     |.| |.||.
 Frog   790 ESGPRCSSPVDTESSSSDGRTKHSQDKLFSAASPCVWNVCVARKNPTLGSDSSSSGGSDSDEEDK 854

  Fly   918 EGMWTKPLGADRPSET---------EQITPISNGPDSKVNELGLPFS--NHANDISSNNVDGHEA 971
            ..:.|:.:......||         |:.|..||..|..::::.:..|  ..|:.:||...|    
 Frog   855 HNIVTETISTGSGHETIRLTMDTKNEKATFSSNPDDVTIDQISVTDSRPKKASPLSSCTED---- 915

  Fly   972 NITTEQQKLAAAAKTN 987
              .:::|..||...|:
 Frog   916 --PSQEQSAAAQCDTS 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fmtNP_001261470.1 SAPS 129..465 CDD:282368 95/344 (28%)
ppp6r2XP_012815510.2 SAPS 128..539 CDD:398279 139/550 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5245
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 294 1.000 Inparanoid score I2703
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000781
OrthoInspector 1 1.000 - - otm47645
Panther 1 1.100 - - LDO PTHR12634
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X542
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.150

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