DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prdm13 and ZNF335

DIOPT Version :10

Sequence 1:NP_648032.1 Gene:Prdm13 / 38713 FlyBaseID:FBgn0035687 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_071378.1 Gene:ZNF335 / 63925 HGNCID:15807 Length:1342 Species:Homo sapiens


Alignment Length:303 Identity:59/303 - (19%)
Similarity:93/303 - (30%) Gaps:102/303 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 PFLTPLNIQGNSRYMCHLCHLTFETPHPLKIHL------------ALGCG-RSAMDILWMRLHYA 219
            |.|.|        ::|.:|...|.:...|:.|:            .|.|. ||..   |..|...
Human   460 PLLRP--------FLCRICGSRFLSHEDLRFHVNSHEAGDPQLFKCLQCSYRSRR---WSSLKEH 513

  Fly   220 L---------KAAARSHTETQHSPIPATSSTSSASPTHSPPPQMPPRFSAFRPIAALTQSLPMVP 275
            :         |....|:|......:...::..|......|.|  .|:.|:|           ..|
Human   514 MFNHVGSKPYKCDECSYTSVYRKDVIRHAAVHSRDRKKRPDP--TPKLSSF-----------PCP 565

  Fly   276 VTTAATPLSYLPSMSMATAPLSTNPMNAAAQIEAIVSNMGASKQGHLCIYCGKVYSRKYGLKIHI 340
            |.....|:....:..|.|                     .::::.|:|..|||.:.::|..|:|:
Human   566 VCGRVYPMQKRLTQHMKT---------------------HSTEKPHMCDKCGKSFKKRYTFKMHL 609

  Fly   341 RTH---TGFKPLKCKFCLRPFGDPSNLNKHVRLHLQTHP----------------SSSAGVADGG 386
            .||   ...:..||:||.....|...|..|...|:...|                .|...|...|
Human   610 LTHIQAVANRRFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHTG 674

  Fly   387 ASGADMDGDVDIEGETDADYQCHVCHKSFPRRRDLQRHMETRH 429
            |.                .:.|..||.|...:::|:.|:..||
Human   675 AK----------------PFACEYCHFSTRHKKNLRLHVRCRH 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prdm13NP_648032.1 KREPA <250..>352 CDD:483960 21/104 (20%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..371 CDD:275368 6/19 (32%)
zf-C2H2 406..427 CDD:395048 6/20 (30%)
C2H2 Zn finger 408..427 CDD:275368 6/18 (33%)
ZNF335NP_071378.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..102
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..228
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 274..442
C2H2 Zn finger 467..487 CDD:275368 5/19 (26%)
C2H2 Zn finger 497..517 CDD:275368 6/22 (27%)
zf-H2C2_2 509..534 CDD:463886 4/24 (17%)
zf-H2C2_5 523..546 CDD:404746 3/22 (14%)
C2H2 Zn finger 529..545 CDD:275370 2/15 (13%)
C2H2 Zn finger 564..584 CDD:275368 5/40 (13%)
zf-H2C2_2 576..601 CDD:463886 7/45 (16%)
C2H2 Zn finger 592..612 CDD:275368 7/19 (37%)
C2H2 Zn finger 623..643 CDD:275368 6/19 (32%)
C2H2 Zn finger 651..672 CDD:275368 2/20 (10%)
C2H2 Zn finger 680..699 CDD:275368 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 732..763
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 964..1013
C2H2 Zn finger 1021..1041 CDD:275368
Involved in the interaction with CCAR2. /evidence=ECO:0000269|PubMed:19131338 1041..1342
C2H2 Zn finger 1049..1069 CDD:275368
zf-H2C2_5 1075..1099 CDD:404746
C2H2 Zn finger 1077..1097 CDD:275368
zf-H2C2_2 1089..1114 CDD:463886
C2H2 Zn finger 1105..1126 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.