DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prdm13 and ZNF407

DIOPT Version :10

Sequence 1:NP_648032.1 Gene:Prdm13 / 38713 FlyBaseID:FBgn0035687 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_060227.2 Gene:ZNF407 / 55628 HGNCID:19904 Length:2248 Species:Homo sapiens


Alignment Length:403 Identity:78/403 - (19%)
Similarity:124/403 - (30%) Gaps:162/403 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LSNGELIVSGSLLRQIKLSED--------------------------VYSFNAIFELHGGQVRVR 142
            |.|.|::::.....:..|.||                          :|||        |:....
Human  1303 LGNKEILMNSQHETEFILEEDGPASDSTVESSDVYETIISIDDKGQAMYSF--------GRFDSS 1359

  Fly   143 LVRDVAREDEIVAWFGEELVLLMGIPFL-TPL---------------NIQGNSRYMCHLCHLTFE 191
            ::|....||..:....||.::..|:... .||               :|..::|..|..|....:
Human  1360 IIRIKNPEDGELIDQSEEGLIATGVRISELPLKDCAQGVKKKKSEGSSIGESTRIRCDDCGFLAD 1424

  Fly   192 TPHPLKIHLA------------LGCGRSAMDILWMRLHYALKAAARSHTETQHSPIPATSSTSSA 244
            ....|.:|:|            |.||:|.  .....||..|  |:..|...:.:.:         
Human  1425 GLSGLNVHIAMKHPTKEKHFHCLLCGKSF--YTESNLHQHL--ASAGHMRNEQASV--------- 1476

  Fly   245 SPTHSPPPQMPPRFSAFRPIAALTQSLPMVPVTTAATPLSYLPSMSMATAPLSTNP---MNAAAQ 306
                   .::|...:.|:.:                          ..|.|..:..   ::...|
Human  1477 -------EELPEGGATFKCV--------------------------KCTEPFDSEQNLFLHIKGQ 1508

  Fly   307 IEAIVSNMG--------------ASKQGHLCIYCGKV--YSRKYGLKIHIRTHTGFKPLKCKFC- 354
            .|.::..:.              ...||::|.||||:  .|.......|||||||.||.|||.| 
Human  1509 HEELLREVNKYIVEDTEQINREREENQGNVCKYCGKMCRSSNSMAFLAHIRTHTGSKPFKCKICH 1573

  Fly   355 --LRPFGDPSNLNKHVRLHLQTHPSSSAGVADGGASGADMDGDVDIEGETDADYQCHVCHKSFPR 417
              ....||..|   ||:.||...                             :|:||||..:|..
Human  1574 FATAQLGDARN---HVKRHLGMR-----------------------------EYKCHVCGVAFVM 1606

  Fly   418 RRDLQRHMETRHG 430
            ::.|..|:..:||
Human  1607 KKHLNTHLLGKHG 1619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prdm13NP_648032.1 KREPA <250..>352 CDD:483960 24/120 (20%)
C2H2 Zn finger 323..343 CDD:275368 9/21 (43%)
C2H2 Zn finger 351..371 CDD:275368 8/22 (36%)
zf-C2H2 406..427 CDD:395048 8/20 (40%)
C2H2 Zn finger 408..427 CDD:275368 7/18 (39%)
ZNF407NP_060227.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..84
C2H2 Zn finger 188..208 CDD:275368
C2H2 Zn finger 217..238 CDD:275368
C2H2 Zn finger 246..268 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..322
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 494..515
C2H2 Zn finger 590..614 CDD:275371
C2H2 Zn finger 617..639 CDD:275371
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 667..700
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 821..847
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 910..962
C2H2 Zn finger 1416..1445 CDD:275371 5/28 (18%)
C2H2 Zn finger 1446..1468 CDD:275371 8/25 (32%)
C2H2 Zn finger 1488..1509 CDD:275371 2/46 (4%)
C2H2 Zn finger 1539..1561 CDD:275368 9/21 (43%)
zf-H2C2_2 1557..1578 CDD:463886 13/20 (65%)
C2H2 Zn finger 1569..1589 CDD:275368 8/22 (36%)
C2H2 Zn finger 1597..1617 CDD:275368 7/19 (37%)
C2H2 Zn finger 1630..1650 CDD:275368
zf-H2C2_2 1642..1669 CDD:463886
C2H2 Zn finger 1658..1680 CDD:275368
C2H2 Zn finger 1688..1708 CDD:275368
zf-H2C2_2 1700..1725 CDD:463886
zf-H2C2_5 1714..1738 CDD:404746
C2H2 Zn finger 1716..1736 CDD:275368
zf-H2C2_2 1728..1753 CDD:463886
C2H2 Zn finger 1744..1761 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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