DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prdm13 and znf507

DIOPT Version :10

Sequence 1:NP_648032.1 Gene:Prdm13 / 38713 FlyBaseID:FBgn0035687 Length:465 Species:Drosophila melanogaster
Sequence 2:XP_005166517.3 Gene:znf507 / 393453 ZFINID:ZDB-GENE-040426-1233 Length:1030 Species:Danio rerio


Alignment Length:513 Identity:102/513 - (19%)
Similarity:153/513 - (29%) Gaps:190/513 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKRSASLIFRIEQLLPSTSITPTSMTTSSTETTLTA--TTSTASPAKRMRMSNPRPGVYASQYTP 74
            ::|:.|...|:..|.....:.........::||...  ..||.||....||      |......|
Zfish   523 RRRTYSESLRLHSLAAEVLVAMPMRAPELSKTTAKGIHDLSTQSPDTGQRM------VETDTANP 581

  Fly    75 KDTC-------SMAIPTSALLGSTVMPTDGSRSHCQLSNGELIVSG--------SLLRQIKLSED 124
            |.:.       |.|:....|.||.             .:.|::|.|        |||..|:..::
Zfish   582 KSSSGELNGGESTALINLGLQGSK-------------DSREVLVEGPSKAGISMSLLTVIERLQE 633

  Fly   125 VYSFNA-----IFEL-------HGGQV--RVRLVRDVAREDEIVAWFGEELVLLMGIPFLTPLNI 175
            ....|.     :.||       |.|.|  .|.:..||:..|.:|.:                  |
Zfish   634 RSDQNTSDEDILKELQDNAQSQHAGGVPGGVAVSGDVSTADSLVEY------------------I 680

  Fly   176 QGNSR-YMCHLCHLTFETPHPLKIHLALG----------CGRSAMDILWM--------------- 214
            .|:.| |.|.||..:......:|.||.:.          |...|.|...:               
Zfish   681 AGSERPYRCRLCLYSSGNKGYIKQHLRVHRQRQPYQCPICEHIACDSKDLERHMIHHFKPRLYSC 745

  Fly   215 -----RLHYALKAAARSHTETQHSPIPATSSTSSASPTHSPPPQMPPRFSAFRPIAALTQSLPMV 274
                 |.||  |:..|:|....|.     ....|:|.||                          
Zfish   746 KQCTERFHY--KSQLRNHERDGHG-----IDDISSSLTH-------------------------- 777

  Fly   275 PVTTAATPLSYLPSMSMATAPLSTNPMNAAAQI--EAIVSNMGASKQGHLCIYCGKVYSRKYGLK 337
                               |..||..|..:|::  |..|......|    |..|....|...|::
Zfish   778 -------------------AEESTAIMEESAKMTDEDPVGEQSVFK----CDVCDYTSSTYVGVR 819

  Fly   338 IHIRTHTGFKPLKCKFCLRPFGDPSNLNKHVRLHLQTHPSSSAGVADGGASGADMDGDVDIEGET 402
            .|.|.|...||.:|..|.....:.::|..|::.|.|.|.:...                 :|   
Zfish   820 NHRRIHNSDKPYRCCSCDFATTNMNSLKSHMKRHPQEHQAMQL-----------------LE--- 864

  Fly   403 DADYQCHVCHKSFPRRRDLQRHMETRHGGHHSHSHSE---------SRSS-STSTSST 450
              .|:|.:|.........|:.|| .:|.|..::::.:         |:|| |.|..||
Zfish   865 --QYRCSLCGYVCSHPPSLKSHM-WKHAGDQNYNYEQVNKAINEAISQSSRSPSVKST 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prdm13NP_648032.1 KREPA <250..>352 CDD:483960 17/103 (17%)
C2H2 Zn finger 323..343 CDD:275368 6/19 (32%)
C2H2 Zn finger 351..371 CDD:275368 4/19 (21%)
zf-C2H2 406..427 CDD:395048 6/20 (30%)
C2H2 Zn finger 408..427 CDD:275368 5/18 (28%)
znf507XP_005166517.3 None

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