Protein Alignment Prdm13 and CG9932

DIOPT Version :10

• Sequence 1: NP_648032.1
• Gene: Prdm13 / 38713
• FlyBaseID: FBgn0035687
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: NP_609599.1
• Gene: CG9932 / 34701
• FlyBaseID: FBgn0262160
• Length: 2171
• Species: Drosophila melanogaster
• Alignment Length: 551
• Identity: 105/551 - (19%)
• Similarity: 170/551 - (30%)
• Gaps: 228/551 - (41%)

  Fly    27 PSTSITPTSMTTSSTE---TTLTATTSTASPAKRMRMSNPRPGV--YASQYTPKDTCSMAIPTSA 86
            ||::..|:|.::||:.   :|.:|..|.::.|.....|.|.|..  .||.|.........:||.|
  Fly  1334 PSSNSFPSSSSSSSSSSMASTSSAAGSASASASSTTSSPPPPAASSSASAYMAAMAPQKHVPTVA 1398

  Fly    87 LL------------GSTVMPT--DGSR--------SHC-QLSNGELIVSGSLLRQIKLSEDVYSF 128
            .:            ||..:.|  ||.|        .|| |:||.:.::.    |..:|.
  Fly  1399 QMSHPQTRFHSHSPGSPSLLTMADGDRREPSPYRCGHCHQVSNWKHVIQ----RHCRLK------ 1453

  Fly   129 NAIFELHGGQVRVRLVRDVAREDEIVAWFGEELVLLMGIPFLTPLNIQGNSRYMCHLCHLTFETP 193
                  |.|.:|:..:...|                         ::..|:.
  Fly  1454 ------HSGDIRIETLERGA-------------------------SVSANAP------------- 1474

  Fly   194 HPLKIHLALGCGRSAMDILWMRLHYALKAAARSHTETQHSPIPAT-----SSTSSASPTHSPPPQ 253
               .|:..||.|.|              ..::||.....:||.:.     |:|::.|..:|
  Fly  1475 ---PIYRPLGAGAS--------------NESQSHIHNPSNPITSNILKSGSNTNANSNINS---- 1518

  Fly   254 MPPRFSAFRPIAALTQSLPMVPVTTAATPLSYLPSMSMATAPLSTNPMNA-----------AAQI 307
                 ::.:|:...|:.|..:    ..||||       |:|....|..|.           ||..
  Fly  1519 -----NSAQPLLLTTKQLEQI----FHTPLS-------ASAAAVVNAANTQQDIQAAAAYWAAAC 1567

  Fly   308 EAIVSNMGA---------------------------------SKQGHLCIYCGKVYSRKYGLKIH 339
            :|:|:|..|                                 ||| ..|..|..:...|..:..|
  Fly  1568 KAVVANSSAEELLQLQQNDQIEITRLPTTTEHSIGSSGNNTKSKQ-QKCPVCPYISESKSQMNYH 1631

  Fly   340 IRTHTGFKP--LKCKFCLRPFGDPSNLNKHVR-LHLQTHPSSSAGVADGGASGADMDG------- 394
            :..|   ||  .:|:.|........:|:.|:| :|.|...:|.||.|.|.|.|....|
  Fly  1632 VSLH---KPTQYECRLCTFVCAKKQHLSSHMRTVHQQQMVASGAGAAAGAAGGVGGGGAASLGLD 1693

  Fly   395 ----------------------------DVDIEGETDA---------DYQ------CHVCHKSFP 416
                                        .:.::..:||         :||      |..|...|.
  Fly  1694 FSVALQLAAAAKQVQQLPASTPLSIDLSQIQMDAASDAELNPQQLPPEYQYKLISYCPRCPARFA 1758

  Fly   417 RRRDLQRHMETRHGGH---HSHSHSESRSSS 444
            ::.:.:|:.:.....|   ||....|.:..|
  Fly  1759 QKHNDERNAKQELEQHLLAHSDQEPEDQDPS 1789

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prdm13	NP_648032.1	KREPA	<250..>352	CDD:483960	27/147 (18%)
		C2H2 Zn finger	323..343	CDD:275368	4/19 (21%)
		C2H2 Zn finger	351..371	CDD:275368	5/20 (25%)
		zf-C2H2	406..427	CDD:395048	6/26 (23%)
		C2H2 Zn finger	408..427	CDD:275368	4/18 (22%)
CG9932	NP_609599.1	C2H2 Zn finger	339..359	CDD:275368
		C2H2 Zn finger	366..386	CDD:275368
		C2H2 Zn finger	394..414	CDD:275368
		C2H2 Zn finger	816..836	CDD:275370
		C2H2 Zn finger	844..862	CDD:275370