DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prdm13 and Zfp64

DIOPT Version :9

Sequence 1:NP_648032.1 Gene:Prdm13 / 38713 FlyBaseID:FBgn0035687 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_033590.2 Gene:Zfp64 / 22722 MGIID:107342 Length:676 Species:Mus musculus


Alignment Length:293 Identity:71/293 - (24%)
Similarity:102/293 - (34%) Gaps:85/293 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 YMCHLCHLTFETPHPLKIHLALGCGRSAMDILWMRLHYALKAAARSHTETQHSPIPATSSTSSAS 245
            ::|.||...|........|...||                        :...:|:.|.|:....:
Mouse    31 HICGLCKQHFSNLDAFVAHKQSGC------------------------QLTTTPVTAPSTVQFVA 71

  Fly   246 PTHSPPPQMPPRFSAFRPIAALTQSLPMVPVTTAATP--------LSYLPS----------MSMA 292
            ....|..|     :....|::.||::      |.:.|        .:|||:          :|:.
Mouse    72 EETEPATQ-----TTTTTISSETQTI------TVSAPEFVFEHGYQTYLPTESTDNQTATVISLP 125

  Fly   293 TAPLSTNPMNAAAQIEAIVSNMGASKQG------------------------HLCIYCGKVYSRK 333
            |...:..|....||     ..:|....|                        |.|..|||.:|||
Mouse   126 TKSRTKKPTAPPAQ-----KRLGCCYPGCQFKTAYGMKDMERHLKIHTGDKPHKCEVCGKCFSRK 185

  Fly   334 YGLKIHIRTHTGFKPLKCKFCLRPFGDPSNLNKHVRLHLQTHPSSSAGVADGGASGADMDGDVDI 398
            ..||.|:|.|||.||.|||.|.....|.|:||||:|:|....|...........:.:.:  .|.:
Mouse   186 DKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQL--TVHL 248

  Fly   399 EGET-DADYQCHVCHKSFPRRRDLQRHMETRHG 430
            ...| ||.:||.:|...|....||:|||....|
Mouse   249 RSHTGDAPFQCWLCSAKFKISSDLKRHMRVHSG 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prdm13NP_648032.1 COG5048 280..>380 CDD:227381 41/141 (29%)
C2H2 Zn finger 323..343 CDD:275368 11/19 (58%)
zf-H2C2_2 336..358 CDD:290200 13/21 (62%)
C2H2 Zn finger 351..371 CDD:275368 10/19 (53%)
zf-C2H2 406..427 CDD:278523 9/20 (45%)
C2H2 Zn finger 408..427 CDD:275368 8/18 (44%)
Zfp64NP_033590.2 COG5048 <149..448 CDD:227381 44/135 (33%)
zf-H2C2_2 159..184 CDD:290200 5/24 (21%)
C2H2 Zn finger 175..195 CDD:275368 11/19 (58%)
zf-H2C2_2 188..209 CDD:290200 13/20 (65%)
C2H2 Zn finger 203..223 CDD:275368 10/19 (53%)
zf-H2C2_2 215..237 CDD:290200 7/21 (33%)
C2H2 Zn finger 231..251 CDD:275368 1/21 (5%)
C2H2 Zn finger 259..279 CDD:275368 8/19 (42%)
zf-H2C2_2 271..295 CDD:290200 6/11 (55%)
C2H2 Zn finger 287..306 CDD:275368
C2H2 Zn finger 343..363 CDD:275368
zf-H2C2_2 355..380 CDD:290200
C2H2 Zn finger 371..389 CDD:275368
zf-C2H2_6 422..448 CDD:290623
C2H2 Zn finger 425..445 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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