Protein Alignment Prdm13 and row-1

DIOPT Version :9

• Sequence 1: NP_648032.1
• Gene: Prdm13 / 38713
• FlyBaseID: FBgn0035687
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: NP_001122473.1
• Gene: row-1 / 172928
• WormBaseID: WBGene00009508
• Length: 584
• Species: Caenorhabditis elegans
• Alignment Length: 306
• Identity: 57/306 - (18%)
• Similarity: 88/306 - (28%)
• Gaps: 129/306 - (42%)

  Fly   175 IQGNSRYMCHLCHLTFETPHPLKIHLALGCGRSAMDILWMRLHYALKAAARSHTETQHSPIPATS 239
            |:|  ::||        :.:|.|.:...|.....::.:|
 Worm   167 IEG--KFMC--------SYNPTKCYKLCGSVVEVINHIW-------------------------- 195

  Fly   240 STSSASPTHSPPPQMPP----------RFSAFRPIAALTQSLPMVPVTTAATPLSYLPSMSMATA 294
                |...|.||  :||          .||..     |..|........:|..|..|.:.....|
 Worm   196 ----AHVIHDPP--LPPIEKKESKDDGMFSCL-----LRNSDAAQLAENSALSLKRLQTCQFCNA 249

  Fly   295 PLSTNPMNAAAQIEAIVSNMGASKQGHL---CIYCGKVYSRKYGLKIHIRTH-TGFKPLKCKFC- 354
            ...|..:..   |..:..:|   :|.||   |..|...:.....|..|::.| :|..|..|:.|
 Worm   250 VFRTVHLKT---IHVVKCHM---EQDHLDTTCNICELDFGNSIALNTHMKKHISGEAPYNCQKCK 308

  Fly   355 ----LRPF----------GDPSNL-----------------NKHVRL-----HLQTHPSSSAGVA 383
                :|.|          .|...|                 :||:.:     |:::|
 Worm   309 YRTSVRAFFYQHFIEKHSNDSRTLLCPICLHHEDLRPNVRRSKHIFVREFVNHMRSH-------- 365

  Fly   384 DGGASGADMDGDVDIEGETDADYQCHVCHKSFPRRRDLQRHMETRH 429
               |.|..|              :||||..:|..|..|:.|....|
 Worm   366 ---ALGPQM--------------RCHVCALTFTSRLLLEAHRTNDH 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prdm13	NP_648032.1	COG5048	280..>380	CDD:227381	27/140 (19%)
		C2H2 Zn finger	323..343	CDD:275368	4/19 (21%)
		zf-H2C2_2	336..358	CDD:290200	8/27 (30%)
		C2H2 Zn finger	351..371	CDD:275368	8/56 (14%)
		zf-C2H2	406..427	CDD:278523	8/20 (40%)
		C2H2 Zn finger	408..427	CDD:275368	8/18 (44%)
row-1	NP_001122473.1	GAT1	<15..288	CDD:227928	30/173 (17%)
		C2H2 Zn finger	244..265	CDD:275368	3/23 (13%)
		C2H2 Zn finger	275..295	CDD:275368	4/19 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24403
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100