| Sequence 1: | NP_648032.1 | Gene: | Prdm13 / 38713 | FlyBaseID: | FBgn0035687 | Length: | 465 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002932206.1 | Gene: | prdm13 / 100490238 | XenbaseID: | XB-GENE-960155 | Length: | 632 | Species: | Xenopus tropicalis |
| Alignment Length: | 660 | Identity: | 148/660 - (22%) |
|---|---|---|---|
| Similarity: | 211/660 - (31%) | Gaps: | 303/660 - (45%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 67 VYASQYTPKDTCSMAIPTSALLGSTV-----------MPTDGSRSHCQLSNGELIVSG------- 113
Fly 114 -SLLRQIKLSEDVYSFNAIFELHGGQVRVRLVRDVAREDEIVAWFGEELVLLMGI-PFLTPLNIQ 176
Fly 177 -GNSRYMCHLCHLTFETPHPLKIH----------------------------------------- 199
Fly 200 ------LALGCGR------SAMDILWMRLHYALKAAARSHTE----------------------- 229
Fly 230 ------------------TQHSPIPATSST----------------------------------- 241
Fly 242 -----------------------------------------SSASPT----HSPPP-------QM 254
Fly 255 PPRFSAFRPIAALTQSLPMVPVTT------AATP-----------LSYLPSMSMATAPLSTNP-- 300
Fly 301 ------------------------MNAAAQIEAI----VSNMGASKQGHLCIYCGKVYSRKYGLK 337
Fly 338 IHIRTHTGFKPLKCKFCLRPFGDPSNLNKHVRLHLQTHPSSSAGVADGGASGADMDGDVDIEGET 402
Fly 403 DADYQCHVCHKSFPRRRDLQRHMETRHGG-----------HHSHSHSESRSSSTSTSSTTTMT-- 454
Fly 455 -ATVTTSTSK 463 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Prdm13 | NP_648032.1 | COG5048 | 280..>380 | CDD:227381 | 59/140 (42%) |
| C2H2 Zn finger | 323..343 | CDD:275368 | 16/19 (84%) | ||
| zf-H2C2_2 | 336..358 | CDD:290200 | 18/21 (86%) | ||
| C2H2 Zn finger | 351..371 | CDD:275368 | 17/19 (89%) | ||
| zf-C2H2 | 406..427 | CDD:278523 | 11/20 (55%) | ||
| C2H2 Zn finger | 408..427 | CDD:275368 | 10/18 (56%) | ||
| prdm13 | XP_002932206.1 | PR-SET_PRDM13 | 17..118 | CDD:380974 | 22/101 (22%) |
| C2H2 Zn finger | 504..524 | CDD:275368 | 16/19 (84%) | ||
| zf-C2H2 | 504..524 | CDD:333835 | 16/19 (84%) | ||
| zf-H2C2_2 | 517..>535 | CDD:372612 | 15/17 (88%) | ||
| zf-C2H2 | 531..552 | CDD:333835 | 18/20 (90%) | ||
| C2H2 Zn finger | 532..552 | CDD:275368 | 17/19 (89%) | ||
| C2H2 Zn finger | 561..579 | CDD:275368 | 10/17 (59%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 51 | 1.000 | Domainoid score | I11412 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 186 | 1.000 | Inparanoid score | I3800 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D489976at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0007194 | |
| OrthoInspector | 1 | 1.000 | - | - | oto104263 | |
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X6071 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 7 | 7.060 | |||||