Sequence 1: | NP_648032.1 | Gene: | Prdm13 / 38713 | FlyBaseID: | FBgn0035687 | Length: | 465 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005167155.1 | Gene: | znf335 / 100148891 | ZFINID: | ZDB-GENE-130530-814 | Length: | 1534 | Species: | Danio rerio |
Alignment Length: | 290 | Identity: | 55/290 - (18%) |
---|---|---|---|
Similarity: | 98/290 - (33%) | Gaps: | 69/290 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 168 PFLTPLNIQGNSRYMCHLCHLTFETPHPLKIHLALGCGRSAMDILWMRLHYALK--AAARSH--- 227
Fly 228 --------------------TETQHSPIPATSSTSSASPTHSPPPQMPPRFSAFRPIAALTQSLP 272
Fly 273 MVPVTTAATPLSYLPSMSMATAPLSTNPMNAAAQIEAIVSNMGASKQGHLCIYCGKVYSRKYGLK 337
Fly 338 IHIRTH---TGFKPLKCKFCLRPFGDPSNLNKHVRLHLQTHPSSSAGVADGGASGADMDGDVDIE 399
Fly 400 GETDADYQCHVCHKSFPRRRDLQRHMETRH 429 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Prdm13 | NP_648032.1 | COG5048 | 280..>380 | CDD:227381 | 23/102 (23%) |
C2H2 Zn finger | 323..343 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 336..358 | CDD:290200 | 9/24 (38%) | ||
C2H2 Zn finger | 351..371 | CDD:275368 | 6/19 (32%) | ||
zf-C2H2 | 406..427 | CDD:278523 | 6/20 (30%) | ||
C2H2 Zn finger | 408..427 | CDD:275368 | 6/18 (33%) | ||
znf335 | XP_005167155.1 | COG5048 | <592..838 | CDD:227381 | 31/186 (17%) |
C2H2 Zn finger | 699..719 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 729..749 | CDD:275368 | 3/19 (16%) | ||
zf-H2C2_2 | 741..766 | CDD:290200 | 1/24 (4%) | ||
C2H2 Zn finger | 803..823 | CDD:275368 | 4/40 (10%) | ||
zf-H2C2_2 | 816..839 | CDD:290200 | 7/43 (16%) | ||
zf-C2H2 | 829..851 | CDD:278523 | 8/21 (38%) | ||
C2H2 Zn finger | 831..851 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 862..882 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 874..898 | CDD:290200 | 4/23 (17%) | ||
C2H2 Zn finger | 890..911 | CDD:275368 | 1/20 (5%) | ||
C2H2 Zn finger | 919..936 | CDD:275368 | 5/16 (31%) | ||
C2H2 Zn finger | 1215..1235 | CDD:275370 | |||
C2H2 Zn finger | 1243..1263 | CDD:275368 | |||
C2H2 Zn finger | 1271..1291 | CDD:275368 | |||
zf-H2C2_2 | 1283..1308 | CDD:290200 | |||
C2H2 Zn finger | 1299..1320 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24403 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |