DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Ac and Lcp65Aa

DIOPT Version :9

Sequence 1:NP_477279.1 Gene:Lcp65Ac / 38708 FlyBaseID:FBgn0020642 Length:109 Species:Drosophila melanogaster
Sequence 2:NP_477280.1 Gene:Lcp65Aa / 38709 FlyBaseID:FBgn0020645 Length:102 Species:Drosophila melanogaster


Alignment Length:102 Identity:50/102 - (49%)
Similarity:75/102 - (73%) Gaps:2/102 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TVAIVFTALFAVVLAAPAPDADTQILRLESDVQPEGYNFALETSDGKKHEEQGQLKNVGTEQEAI 68
            ::.::...|.|:.|||.||||  :|:.|.|||..:.|::..|||||.|.|:.|.||::|.|::|:
  Fly     3 SILVLACLLSALCLAAAAPDA--EIVDLVSDVNADSYSYKFETSDGTKQEQHGSLKSLGPEEDAL 65

  Fly    69 VVRGSYSFVADDGQTYTVNYIADENGFQPEGAHLPNV 105
            .|.||:|||.|||||:.::|:||||||||:|..:|::
  Fly    66 QVAGSFSFVGDDGQTHAISYVADENGFQPQGEDIPHL 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AcNP_477279.1 Chitin_bind_4 40..95 CDD:278791 30/54 (56%)
Lcp65AaNP_477280.1 Chitin_bind_4 37..92 CDD:278791 30/54 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466893
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG27015
OrthoDB 1 1.010 - - D130920at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.960

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