DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Ac and Lcp3

DIOPT Version :9

Sequence 1:NP_477279.1 Gene:Lcp65Ac / 38708 FlyBaseID:FBgn0020642 Length:109 Species:Drosophila melanogaster
Sequence 2:NP_001260803.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster


Alignment Length:100 Identity:31/100 - (31%)
Similarity:49/100 - (49%) Gaps:9/100 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VFTALFAVVLAA-PAPDADTQILRLESDVQPEGYNFALETSDGKKHEEQGQLKNVGTEQEAIVVR 71
            :|..|....||| .|.:|:.::..|.:||||:|:...|...||......|.:..        .:.
  Fly     1 MFKILLVCSLAALVAANANVEVKELVNDVQPDGFVSKLVLDDGSASSATGDIHG--------NID 57

  Fly    72 GSYSFVADDGQTYTVNYIADENGFQPEGAHLPNVP 106
            |.:.:::.:|....|:|.|||||:||:...||..|
  Fly    58 GVFEWISPEGVHVRVSYKADENGYQPQSDLLPTPP 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AcNP_477279.1 Chitin_bind_4 40..95 CDD:278791 12/54 (22%)
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 11/48 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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