DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ac and Cpr30F

DIOPT Version :10

Sequence 1:NP_477279.1 Gene:Lcp65Ac / 38708 FlyBaseID:FBgn0020642 Length:109 Species:Drosophila melanogaster
Sequence 2:NP_723504.1 Gene:Cpr30F / 318997 FlyBaseID:FBgn0051876 Length:146 Species:Drosophila melanogaster


Alignment Length:112 Identity:33/112 - (29%)
Similarity:50/112 - (44%) Gaps:16/112 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AIVFTALFAVVLAAP-------APDADTQILRLESDVQ-PEGYNFALETSDGKKHEEQGQLKNVG 62
            |:|...:..|..||.       :|.|..:.|....:|: |..|:||....|    |..|.:|:..
  Fly     3 ALVSLFILGVGAAAAIELPIYHSPAAIVKPLLKTVEVEAPAHYDFAYSVHD----EHTGDIKSQT 63

  Fly    63 TEQEAIVVRGSYSFVADDGQTYTVNYIAD-ENGFQPEGAHLPNVPIG 108
            ..::...|:|.|:.|..||...||:|.:| .|||   .|.:...|:|
  Fly    64 ESRKGDQVQGQYTLVDADGYLRTVDYTSDAHNGF---NAVVRRDPLG 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AcNP_477279.1 Chitin_bind_4 40..95 CDD:459790 18/55 (33%)
Cpr30FNP_723504.1 Chitin_bind_4 45..97 CDD:459790 18/55 (33%)

Return to query results.
Submit another query.