DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ad and LOC4578437

DIOPT Version :10

Sequence 1:NP_477278.1 Gene:Lcp65Ad / 38707 FlyBaseID:FBgn0020641 Length:108 Species:Drosophila melanogaster
Sequence 2:XP_001238116.2 Gene:LOC4578437 / 4578437 VectorBaseID:AGAMI1_013245 Length:180 Species:Anopheles gambiae


Alignment Length:128 Identity:33/128 - (25%)
Similarity:43/128 - (33%) Gaps:42/128 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KFTIAIAFTCILACSLAAP---------------------PAIQQDAQ------VLRFDSDVLPE 39
            ||...:||..:.:.....|                     ||:.:..|      |...:....|.
Mosquito     4 KFLAVVAFLAVASAQHYDPHHYQPQYHQYHHEPALVKTIQPALIKTVQPALVKTVKHVEYPEAPA 68

  Fly    40 GYKFAV-----ETSDGKSHQEEGQLKDVGTDHEAIVVRGSYAYVGDDGQTYSIQYLADE-NGF 96
            .|:|..     .|.|.||.|||..    |.|     |:|.|..:..||....:.|.||| |||
Mosquito    69 EYQFQYSVHDDHTGDIKSQQEERH----GDD-----VKGQYTLIDADGHRRVVDYTADEHNGF 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AdNP_477278.1 Chitin_bind_4 41..96 CDD:459790 21/60 (35%)
LOC4578437XP_001238116.2 None

Return to query results.
Submit another query.