DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ad and Cpr65Av

DIOPT Version :9

Sequence 1:NP_001261466.1 Gene:Lcp65Ad / 38707 FlyBaseID:FBgn0020641 Length:108 Species:Drosophila melanogaster
Sequence 2:NP_729146.1 Gene:Cpr65Av / 318014 FlyBaseID:FBgn0052405 Length:111 Species:Drosophila melanogaster


Alignment Length:101 Identity:51/101 - (50%)
Similarity:71/101 - (70%) Gaps:1/101 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAIAFTCILACSLAAPPAIQQDAQVLRFDSD-VLPEGYKFAVETSDGKSHQEEGQLKDVGTDHEA 68
            :||....:|:...|||....|.|.:||:|:| :..:||.|..|||||.:.||:.::|:.|||.||
  Fly     9 LAICAFALLSTIRAAPLDDSQHATILRYDNDNIGTDGYNFGYETSDGVTRQEQAEVKNAGTDQEA 73

  Fly    69 IVVRGSYAYVGDDGQTYSIQYLADENGFQPEGAHLP 104
            :.||||.::|..|||||::.|:||||||||:|.|||
  Fly    74 LSVRGSVSWVAPDGQTYTLHYIADENGFQPQGDHLP 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AdNP_001261466.1 Chitin_bind_4 41..96 CDD:278791 30/54 (56%)
Cpr65AvNP_729146.1 Chitin_bind_4 46..101 CDD:278791 30/54 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2EQ63
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG27015
OrthoDB 1 1.010 - - D130920at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.