DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ad and LOC1270062

DIOPT Version :10

Sequence 1:NP_477278.1 Gene:Lcp65Ad / 38707 FlyBaseID:FBgn0020641 Length:108 Species:Drosophila melanogaster
Sequence 2:XP_001688064.1 Gene:LOC1270062 / 1270062 VectorBaseID:AGAMI1_011311 Length:150 Species:Anopheles gambiae


Alignment Length:120 Identity:34/120 - (28%)
Similarity:53/120 - (44%) Gaps:32/120 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FTIAIAFTCILACSLAAPP------------------AIQQDAQVLRFDSDVLPEGYKFAVETSD 49
            ::.||.....:.|.:||.|                  .|||| |::..|.     .|.:..|||:
Mosquito     2 YSKAIVLAGFVLCLVAAAPPRKAVRASPGGGPDSEAIVIQQD-QIINDDG-----SYNYVFETSN 60

  Fly    50 GKSHQEEGQLKDVGTDHEAIVVRGSYAYVGDDGQTYSIQYLADENGFQPEGAHLP 104
            |        ::...:..:.|...|.::|...||...::.|:||:.||||:|||||
Mosquito    61 G--------IRAQASSSDGIRTSGDFSYPAPDGSNIALVYVADDYGFQPQGAHLP 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AdNP_477278.1 Chitin_bind_4 41..96 CDD:459790 13/54 (24%)
LOC1270062XP_001688064.1 Chitin_bind_4 52..99 CDD:459790 13/54 (24%)

Return to query results.
Submit another query.