DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZKSCAN4 and trem

DIOPT Version :10

Sequence 1:NP_061983.2 Gene:ZKSCAN4 / 387032 HGNCID:13854 Length:545 Species:Homo sapiens
Sequence 2:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster


Alignment Length:452 Identity:113/452 - (25%)
Similarity:184/452 - (40%) Gaps:111/452 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   117 HPESGEEVV--VLLEYLERQLDEP---APQVPVG--DQGQELLCCKMALLTQTQGSQSSQCQPMK 174
            :|..|||::  :..|....:||:.   ...:||.  |...:.:|.|..           :|  ::
  Fly    18 NPSEGEELLHDIFSETASTRLDQMLHICAGIPVSLDDNFPDKMCSKCV-----------RC--LR 69

Human   175 ALFKHESLGSQPLHDRVLQVPGLAQGGCCREDAMVASRLTPGSQGLLKM-EDVAL-TLTPGW--- 234
            ..:|.. |..|..|..::.:          .|...::....|...||.: ||::: ::...|   
  Fly    70 LCYKFR-LTCQRSHQHIMDM----------LDREASNANAAGEGDLLSIAEDLSVESVLKSWEDY 123

Human   235 -TQLDSS-QVNLYRDEKQENHSSLVSLGGEIQTKSRDL-PPVKKLPE------------------ 278
             :|||.. :|....|::.:..:.:|..|....|...|: .|.:.:|.                  
  Fly   124 ASQLDGGMKVEGEEDQQHQVITYVVEDGDTDDTNMFDVHDPTQPVPNEIEEAETYAEYEEYELLT 188

Human   279 --------KEHGKIC-----------HLREDIAQI-----PTHA--EAGEQEGR----------- 306
                    :|.|...           .:.|||...     ||||  |..::.||           
  Fly   189 NENSPEIAQEKGSTGTDVATEEPPEEEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPK 253

Human   307 -------LQRKQKNAIGSRRHYCHECGKSFAQSSGLTKHRRIHTGEKPYECEDCGKTFIGSSALV 364
                   :.||.:|.:.:  :.|..||..:...:.||:|.:.|:|.||:|||.||:.|:.:..||
  Fly   254 VETFKKKVGRKPRNKLST--YICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLV 316

Human   365 IHQRVHTGEKPYECEECGKVFSHSSNLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHKIHTGE 429
            .|...|||.:||:|..|...|:..|...||.|.||.|:||.||.|.:||:.|.:|..|..|||||
  Fly   317 RHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGE 381

Human   430 KPYQCNMCGKAFRRNSHLLRHQRIHGDKNVQNPEHGESWESQGRTESQWENTEAPVSYKCNE 491
            ||:.|::|||.|.:...|..|:..|..:        .:|.:.....::.|:.:.......||
  Fly   382 KPHVCDLCGKGFVKAYKLRLHRETHNRR--------ITWRNDAEESTKAEDVKGETPEFLNE 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZKSCAN4NP_061983.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..55
SCAN 49..160 CDD:128708 12/49 (24%)
KRAB 221..281 CDD:214630 15/93 (16%)
zf-C2H2 320..342 CDD:395048 6/21 (29%)
C2H2 Zn finger 322..342 CDD:275368 6/19 (32%)
zf-H2C2_2 335..357 CDD:463886 12/21 (57%)
zf-C2H2 348..370 CDD:395048 9/21 (43%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
COG5048 <374..544 CDD:227381 41/118 (35%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 8/19 (42%)
C2H2 Zn finger 434..454 CDD:275368 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 455..480 1/24 (4%)
C2H2 Zn finger 489..509 CDD:275368 2/3 (67%)
C2H2 Zn finger 517..537 CDD:275368
tremNP_650861.1 zf-AD 11..87 CDD:214871 17/82 (21%)
COG5048 <264..411 CDD:227381 61/156 (39%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 8/19 (42%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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