DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZKSCAN4 and klu-1

DIOPT Version :9

Sequence 1:NP_061983.2 Gene:ZKSCAN4 / 387032 HGNCID:13854 Length:545 Species:Homo sapiens
Sequence 2:NP_493611.2 Gene:klu-1 / 173366 WormBaseID:WBGene00013970 Length:543 Species:Caenorhabditis elegans


Alignment Length:511 Identity:121/511 - (23%)
Similarity:177/511 - (34%) Gaps:115/511 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    13 AQSAEDQTGLLTVKVEKEEASALTAEVRAPCSP--------------ARGPERSRQRFRGFRYPE 63
            :||.|......||.|....|.|:||....|..|              .:.|.:            
 Worm     2 SQSDEASVAEPTVVVATPVAVAVTAPATHPRKPPALVISTIACPTIYEQAPSK------------ 54

Human    64 AAGPREALSRLRELCGQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVVLL 128
            .|.|...||....:....:|.......|.....:...:.|   .:|.|..|.....:...   .|
 Worm    55 PASPTMPLSPYEGITADLMQRIQLFSSQFDHARLSPNYAT---SDLGSSARSSFSSTTSS---FL 113

Human   129 EYLERQLDEPAPQVPVGDQGQELLC---CKMALLTQTQGSQSSQCQPMKALFKHE-----SLGSQ 185
            .|.:|.:|       ..:.|:||:.   |.    |...|:..|........|..|     |||..
 Worm   114 TYRDRSVD-------FDEAGKELISPFDCD----TNCSGTPYSLSTNSGNHFSFEARSVSSLGHS 167

Human   186 PLHDRVLQVPGLAQGGCCREDAMVASRLTPGSQGLLKMEDVALTLTPGWTQLDSSQVNLYRDEKQ 250
            ..|...|...|.|. ...||.:...|.:.|..:     :||        ..|::|.:::....|:
 Worm   168 TAHFNQLLAAGAAY-ELSRERSRSESDMQPTQE-----DDV--------RHLNTSTISVPIYAKK 218

Human   251 ENHSSLVSLGGEIQTKSRDLPPVKKLPEKEHGKI-------CHLREDIAQIPTHAE--AGEQEGR 306
            ..|    ..||||:..|...||.....|:...::       ..:::|:....:...  |.||...
 Worm   219 PLH----KFGGEIKRSSSTPPPTSDEREQVEQRLLLRPSSGMEIKKDLETTNSFVSSWAREQIFA 279

Human   307 LQR-KQKNAIGSRRHYCHECG-----------------KSFAQSSGLTKHRRIHTGEKPYECEDC 353
            :|. ...|.:.:|.  ..:|.                 .:||.....::.:::.     |.|..|
 Worm   280 MQNATMYNLLTARS--AEDCSTISTPGPLKVFPRSKDDMTFAPRDDSSRAKQMQ-----YPCTLC 337

Human   354 GKTFIGSSALVIH------QRVHT---GEKPYECEECGKVFSHSSNLIKHQRTHTGEKPYECDDC 409
            |:.|.....|..|      ||..|   ..|.::|..|.|.||.|..|.:|.|.|||.|||.|..|
 Worm   338 GQAFAVHDRLAKHIASRHRQRSCTLDDASKVHKCNMCSKSFSRSDMLTRHMRLHTGAKPYSCPTC 402

Human   410 GKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAFRRNSHLLRHQRIHG---DKNVQNP 462
            .:.||:|..|..|.:.|||||||.|.||..:..|...:.||.|.|.   |.::..|
 Worm   403 NQVFSRSDHLSTHLRTHTGEKPYACPMCNYSASRRDMISRHMRTHSLTDDSSISTP 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZKSCAN4NP_061983.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 3/8 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..55 6/34 (18%)
SCAN 49..160 CDD:128708 19/113 (17%)
KRAB 221..281 CDD:214630 14/59 (24%)
zf-C2H2 320..342 CDD:306579 3/38 (8%)
C2H2 Zn finger 322..342 CDD:275368 3/36 (8%)
zf-H2C2_2 335..357 CDD:316026 4/21 (19%)
C2H2 Zn finger 350..370 CDD:275368 8/25 (32%)
COG5048 <374..544 CDD:227381 40/92 (43%)
C2H2 Zn finger 378..398 CDD:275368 9/19 (47%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 455..480 2/11 (18%)
C2H2 Zn finger 489..509 CDD:275368
C2H2 Zn finger 517..537 CDD:275368
klu-1NP_493611.2 C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
zf-C2H2 369..391 CDD:278523 9/21 (43%)
C2H2 Zn finger 371..391 CDD:275368 9/19 (47%)
zf-H2C2_2 383..408 CDD:290200 12/24 (50%)
COG5048 395..>448 CDD:227381 24/52 (46%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
zf-H2C2_2 411..436 CDD:290200 12/24 (50%)
C2H2 Zn finger 427..447 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 92 1.000 Inparanoid score I4089
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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