DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Ag1 and Cpr49Af

DIOPT Version :9

Sequence 1:NP_477273.1 Gene:Lcp65Ag1 / 38703 FlyBaseID:FBgn0020638 Length:105 Species:Drosophila melanogaster
Sequence 2:NP_001286347.1 Gene:Cpr49Af / 36352 FlyBaseID:FBgn0033729 Length:126 Species:Drosophila melanogaster


Alignment Length:104 Identity:42/104 - (40%)
Similarity:62/104 - (59%) Gaps:4/104 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFLIVFVALFAVALAAPAAEEPTIVRSESDVGPE-SFKYDWETSDGQAAQAVGQLNDIGTENEA 64
            ||:|:: :|||.||.:|...::|  :..||:|... .:.|.:|..||..|...|.|..:..::..
  Fly     1 MKYLML-IALFVVAASATDNDDP--ISQESNVEYNGKYHYHYELKDGSKATQDGVLKSVNADHNG 62

  Fly    65 ISVSGSYRFIADDGQTYQVNYIADKNGFQPQGAHLPVAP 103
            .||:|.|.|:||||:||.|:|.||:||:...|.|||..|
  Fly    63 ESVNGKYSFVADDGKTYVVSYTADENGYLAVGDHLPTPP 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65Ag1NP_477273.1 Chitin_bind_4 37..92 CDD:306811 23/54 (43%)
Cpr49AfNP_001286347.1 Chitin_bind_4 35..90 CDD:278791 23/54 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2EQ63
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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