DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Ag1 and Pcp

DIOPT Version :10

Sequence 1:NP_477273.1 Gene:Lcp65Ag1 / 38703 FlyBaseID:FBgn0020638 Length:105 Species:Drosophila melanogaster
Sequence 2:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster


Alignment Length:92 Identity:22/92 - (23%)
Similarity:40/92 - (43%) Gaps:9/92 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SALGEAKQTVMASAETAKTNVVKDAVDN-VVSRGIDGAKTLLHGLEEKKDE-VSSKIMGAVTHFT 73
            |.|..:...|.|.|..|....:::|.|: .:.|...||..|:.||.:.:|. |.|.:..|:....
  Fly   429 SLLKNSNPKVQAYAAWALCPCIENAKDSGELVRSFVGALELVVGLLKSRDNFVLSAVCAAIATIA 493

  Fly    74 GSADSAATTANR-------DLPVSTDN 93
            ...::.:..::.       ||..:||:
  Fly   494 RDRENLSVLSDHKVIRMLADLVYTTDD 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65Ag1NP_477273.1 Chitin_bind_4 37..92 CDD:459790 13/63 (21%)
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790
Blue background indicates that the domain is not in the aligned region.

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