DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbn and Cpr73D

DIOPT Version :9

Sequence 1:NP_729143.2 Gene:l(3)mbn / 38701 FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_001097627.1 Gene:Cpr73D / 39897 FlyBaseID:FBgn0036680 Length:597 Species:Drosophila melanogaster


Alignment Length:656 Identity:139/656 - (21%)
Similarity:197/656 - (30%) Gaps:247/656 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALLLLC-TLTHVLSAATTVRPYKFGFTIDEQ---QHRAEKRDERG-----------IIMGEFGFI 60
            :||||| .|.:....|.....|.   ||.|.   |.|....|..|           .:.|.:|..
  Fly    10 SLLLLCAVLGYFSDPARAEIEYN---TISEDGSFQFRHANDDIGGYYHSASGTPDNTVRGRYGSR 71

  Fly    61 T-ADGIYHVTVYATDEEGKFRI--------ISMKSYPYAGPVGSKSVPVTTTPKVLLPAAPVALP 116
            : |.|....|||.....| ||:        :.:..||.. |.||...|:         |.|...|
  Fly    72 SPASGQIEETVYTAGPRG-FRVNGPKIHRKMDLAQYPVL-PRGSPDDPL---------ADPFDDP 125

  Fly   117 KYNFNSEACSGCFLKKSPPKTEIRTLSQPLAPVQPGKPDGSSDIGLNVQLPFRESIAQTVASRLG 181
            .|:|:.........:::.....||.|...|           .|:|      .|.|:.....:..|
  Fly   126 SYSFSFRTPDQSRSEENDSGNRIRGLYSYL-----------DDVG------ERHSVRYAAGAGTG 173

  Fly   182 LLQDTLQTSNTNTNAPNTKTIELGLNIAMST-YYTTKNAVTGHVSTQTSNSQTPSANTKIDYNVG 245
                 .:.||...::|:.        :|.|: .||:.....|.:|.|    :.|:.:.|:     
  Fly   174 -----FEISNAVPDSPSV--------VAYSSPLYTSHPKARGKMSVQ----RGPAGSYKL----- 216

  Fly   246 VVEKASPPVYRPLNIRLNEDVMRQAITYGNTIPGHVPLPNQPLVETSLLPASQVKIFALDGNAKV 310
               .||...:|....|..:.::|...::                              ||.    
  Fly   217 ---IASGSDHRRAESRAPDGLVRGTYSF------------------------------LDD---- 244

  Fly   311 PLASNIQSVAQHPNAGLNAKVPLASNIQSVAQH-PNAGLNAKVPLASNIQSVAQHPNAGLKNINR 374
                                    ..:|...:: ..||:..:|     :|             ||
  Fly   245 ------------------------KGVQRTVEYIAGAGIGYRV-----VQ-------------NR 267

  Fly   375 SGVSSAKTLANTKTRPPHTFNPHQTPLLSSATAPGISGVTANTPTGNVPSNGGGIAAGKAPGNPQ 439
            .|              |.|.|           .|.::......|...: :|..|..||       
  Fly   268 IG--------------PGTHN-----------NPSVADFRLTDPDFRL-ANDFGRGAG------- 299

  Fly   440 AGGSGGIIGAGAPGGRKVSAGGIGSGSAIGGVSGGSKASGNGG------AIGSGSA-IGGGATGS 497
             ||.|...|.|..||..||.|..|.....||...|...|..||      |.|:... .|.|..|:
  Fly   300 -GGLGPKGGGGGSGGGSVSVGASGPSGGAGGAGRGRTPSRPGGKDYLKPADGARDRNRGDGDAGA 363

  Fly   498 KASGFGF-----GSNIGGGVSGSKPSGF-GSESKIGGPDSGSKALGF-------------GSGSK 543
            .....|.     |.:||.|.|.|..:.| |.|.:.|.| :||...|.             ||||.
  Fly   364 ADENLGHHADDQGDDIGLGSSSSGSTNFNGKEDRRGFP-AGSPQRGSTRYDAGGDSSQRGGSGSS 427

  Fly   544 IGGGITGTK-ASGFGG--------EIGSGRGSASSATGDLYKFKYILDYNGHEETGG-----RNG 594
            ....::|:: .:.|||        |.|:|||.|:.              .|....||     |.|
  Fly   428 TRNNVSGSRNRNRFGGVGGVSVSSERGAGRGGAAG--------------GGSSRRGGGAGASREG 478

  Fly   595 DKQGSY 600
            |....|
  Fly   479 DSGLGY 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 31..77 CDD:278791 15/60 (25%)
Chitin_bind_4 575..621 CDD:278791 7/31 (23%)
Cpr73DNP_001097627.1 Chitin_bind_4 127..174 CDD:278791 11/68 (16%)
Chitin_bind_4 <223..257 CDD:278791 6/91 (7%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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