DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbn and Cpr11B

DIOPT Version :9

Sequence 1:NP_729143.2 Gene:l(3)mbn / 38701 FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_572807.1 Gene:Cpr11B / 32203 FlyBaseID:FBgn0030398 Length:197 Species:Drosophila melanogaster


Alignment Length:146 Identity:41/146 - (28%)
Similarity:57/146 - (39%) Gaps:15/146 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   502 FGFGSNIGGGVSGSK--PSGFGSESKIGGPDSGSKALGFGSGSKIGGGITGTKASGFGGEIGSGR 564
            |||.|.|..|....:  |:...|:....|. ||......|:|...|||.:..:..  ..:|...|
  Fly    13 FGFSSAILAGRLSQRYLPTPQASQLHYHGV-SGQGQARPGAGHSFGGGSSYQRQQ--QPQIPIVR 74

  Fly   565 GSASSATGDLYKFKYILDYNGH-EETGGRNG-------DKQGSYFAIGEDAVQRTIEYIANEFGF 621
            ...:|.....|.|.:......| :|||...|       ..||||...|:|..|.|:.|.|::.||
  Fly    75 SDYNSDANGNYNFGFDTGNGIHRDETGEFRGGWPHGSLGVQGSYSYTGDDGKQYTVNYTADKNGF 139

  Fly   622 QPHVSWRKLDAKEALP 637
              |.....|....::|
  Fly   140 --HAEGAHLPVSPSVP 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 31..77 CDD:278791
Chitin_bind_4 575..621 CDD:278791 17/53 (32%)
Cpr11BNP_572807.1 Chitin_bind_4 85..139 CDD:278791 17/53 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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