DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbn and Cpr11A

DIOPT Version :9

Sequence 1:NP_729143.2 Gene:l(3)mbn / 38701 FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_572803.1 Gene:Cpr11A / 32198 FlyBaseID:FBgn0030394 Length:270 Species:Drosophila melanogaster


Alignment Length:157 Identity:45/157 - (28%)
Similarity:60/157 - (38%) Gaps:40/157 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 HPNAGLNAKV----PLASNIQSVAQHPNAGLKNINRSGVSSAKTLANTKTRPPHTFNPHQTPLLS 403
            ||...|:..:    ||||..|.....|::.|.|.||..... :||.:.:        ..|.||..
  Fly   125 HPITELDLDIPEPQPLASAGQRQTVDPSSLLGNKNRFQFLQ-QTLDSDQ--------GSQGPLRG 180

  Fly   404 SATAPGISG--VTANTPTGNVPSNGGGIAAGKAPGNPQAGGSGGIIGAGAPGGRKVSAGGIGSGS 466
            |    |.||  .:..:|.||          |.|.||....|.|..:|.|       ...|:|:|.
  Fly   181 S----GQSGDDYSYTSPYGN----------GNAYGNGVGNGYGNGVGNG-------YGNGVGNGQ 224

  Fly   467 AIGGVSGGSKASGNGGAIGSGSAIGGG 493
            .    :|...|.|||..:|:|...|.|
  Fly   225 G----NGAGNAYGNGNGVGNGYGNGNG 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 31..77 CDD:278791
Chitin_bind_4 575..621 CDD:278791
Cpr11ANP_572803.1 Chitin_bind_4 73..124 CDD:278791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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