DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RHOA and Mtl

DIOPT Version :10

Sequence 1:NP_001655.1 Gene:RHOA / 387 HGNCID:667 Length:193 Species:Homo sapiens
Sequence 2:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster


Alignment Length:191 Identity:109/191 - (57%)
Similarity:135/191 - (70%) Gaps:7/191 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:||||..||||:||.::.|.||..||||||:||.|.::||..||.|.|||||||||||||||
  Fly     8 KCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDRLRP 72

Human    72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQ 136
            ||||.|||.|:|:|:.||.|.||:..||.||:||.||:.||||||.|.|||.|..|...||:...
  Fly    73 LSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAEQGL 137

Human   137 EPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ----ARRGKKKSGCLVL 193
            .|:|.|:|:.:||:|.|..||||||.|:.|::.|||.|.||.|:    .||.:|   ||::
  Fly   138 TPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQRK---CLIM 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHOANP_001655.1 RhoA_like 5..179 CDD:206662 103/171 (60%)
Effector region. /evidence=ECO:0000255 34..42 6/7 (86%)
Switch II region, involved in RAP1GDS1 isoform 2 binding. /evidence=ECO:0000269|PubMed:30190425, ECO:0007744|PDB:5ZHX 61..78 15/16 (94%)
MtlNP_524533.1 RHO 9..182 CDD:197554 103/172 (60%)

Return to query results.
Submit another query.