Protein Alignment loj and Tmed6

DIOPT Version :10

• Sequence 1: NP_648027.3
• Gene: loj / 38698
• FlyBaseID: FBgn0061492
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: NP_079734.1
• Gene: Tmed6 / 66269
• MGIID: 1913519
• Length: 239
• Species: Mus musculus
• Alignment Length: 245
• Identity: 50/245 - (20%)
• Similarity: 112/245 - (45%)
• Gaps: 30/245 - (12%)

  Fly    13 VLPIALICCCLLIDVTSAQEAQ----------QPWYENLPAVAMDYKVHIDAGKEDCYHQYVKAG 67
            :.|:.|:...:::.:.::.::|          ||.:..  |...|:.:.:..|..:|:.|:....
Mouse     1 MFPLLLVAELVVLSLVTSVKSQETDPLHGSKDQPLFRG--ADRNDFAIVVSPGAIECFWQFADQM 63

  Fly    68 ATFYVSFSVVR----GGDGMAGFAVRNPAGEVVKPYQWQATADYTDQVS----PGGYYSVCIDNQ 124
            ...|.|:.|.|    ..|.........|.|.::...|     |...|::    ..|:|.:|:.|:
Mouse    64 GYLYFSYEVQRILGMSHDRHIVATAHTPQGFLIDTSQ-----DVRGQINFATQETGFYQLCLKNE 123

  Fly   125 FSRFAGKLVNIYITV-VKYDAWDKYAKEIEQLQLN--MQNFTATVGTVERNINDMMGYQAHSRHR 186
            .:||:.  :.:|:.. |.|:..:...|:.::.|||  :.....:...||..:..|..:..::|.|
Mouse   124 QNRFSS--IQVYLNFGVFYEGPEVDHKQSQRKQLNDTLDAIKDSTQRVENQVFHMWRFYNYARMR 186

  Fly   187 ESRDYALLLDNNAYIQTFSISQIVVILITCSVQVFFVRKLFEVKSSSKSR 236
            :..|:.||..|..|:..:|.:|.:.|:::.::|::|:::||...::...:
Mouse   187 KVADFFLLQSNYTYVNWWSTAQSLAIVLSGALQLYFLKRLFTASTTDTKK 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
loj	NP_648027.3	EMP24_GP25L	47..228	CDD:426051	43/191 (23%)
Tmed6	NP_079734.1	EMP24_GP25L	43..227	CDD:426051	42/190 (22%)