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Protein Alignment loj and Tmed3

DIOPT Version :9

Sequence 1:	NP_648027.3	Gene:	loj / 38698	FlyBaseID:	FBgn0061492	Length:	237	Species:	Drosophila melanogaster
Sequence 2:	NP_079636.2	Gene:	Tmed3 / 66111	MGIID:	1913361	Length:	221	Species:	Mus musculus

Alignment Length:	202	Identity:	47/202 - (23%)
Similarity:	89/202 - (44%)	Gaps:	25/202 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    39 ENLPAVAMDYKVHIDAGKEDCYHQYVKAGATFYVSFSVVRGGDGMAGFAVRNPAGEVV-----KP 98
            |.|.:..:.:::..:|  :.|:|:.|:.|..|.:.:.|:.||.......|.:|.|.|:     |.
Mouse    26 EPLRSAELTFELPDNA--KQCFHEEVEQGVKFSLDYQVITGGHYDVDCYVEDPRGNVIYRETKKQ 88

  Fly    99 YQWQATADYTDQVSPGGYYSVCIDNQFSRFAGKLVNIYITV-----VKYDAWDKYAKEIEQLQLN 158
            |.     .:|.:....|.|..|..|:||.|:.|.|.....|     :..|..:: ...:.|::
Mouse    89 YD-----SFTYKTEAKGVYRFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGNR-VTALTQME-- 145

  Fly   159 MQNFTATVGTVERNINDMMGYQAHSRHRESRDYALLLDNNAYIQTFSISQIVVILITCSVQVFFV 223
                :|.| |:...:..::..|.|.|.||::|.|...|.|:.:..:|:.:.:.:.:....||..:
Mouse   146 ----SACV-TIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLL 205

  Fly   224 RKLFEVK 230
            :..|..|
Mouse   206 KSFFTEK 212

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.