DRSC/TRiP Functional Genomics Resources

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Protein Alignment loj and opm

DIOPT Version :10

Sequence 1:NP_648027.3 Gene:loj / 38698 FlyBaseID:FBgn0061492 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_061497906.1 Gene:opm / 4576804 VectorBaseID:AGAMI1_010283 Length:247 Species:Anopheles gambiae


Alignment Length:210 Identity:53/210 - (25%)
Similarity:87/210 - (41%) Gaps:29/210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 AVAMDYKVHIDAGKEDCYHQYVKAGATFYVSFSVVRGGDG--MAGFAVRNPAGEVVKPYQWQATA 105
            |:..:..:::..|..||:.:..|||.|..:.:.|:.||.|  ...|.:....|..:       .|
Mosquito    37 ALQKELTINVAPGNVDCFFESAKAGQTIDIEYQVIDGGHGDLDISFELAEATGRTI-------FA 94

  Fly   106 DY--TDQVSP-----GGYYSVCIDNQFSRFAGKLVNIYITVVK------------YDAWDKYAKE 151
            ||  :|.:..     .|.|..|.||.|||...|.|...:.:.:            .|..|....|
Mosquito    95 DYKKSDNIHQFPVPYDGEYKFCFDNGFSRSNSKTVFFELIIGREGDQDDPAGWSDIDLLDGLTPE 159

  Fly   152 IEQLQLNMQNFTATVGTVERNINDMMGYQAHSRHRESRDYALLLDNNAYIQTFSISQIVVILITC 216
             |...:.:|:....:..|..|:......|...|..|:||..:..:|...:..:|..||:|::...
Mosquito   160 -EFYDMKVQDMEDAIKRVRNNLTKARQLQDVLRSHEARDRNVAEENYFKVNVWSFFQILVMVAVG 223

  Fly   217 SVQVFFVRKLFEVKS 231
            ::|||.|:.||:|.|
Mosquito   224 TLQVFMVKSLFDVDS 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lojNP_648027.3 EMP24_GP25L 47..228 CDD:426051 49/201 (24%)
opmXP_061497906.1 None

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