DRSC/TRiP Functional Genomics Resources

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Protein Alignment loj and loj

DIOPT Version :10

Sequence 1:NP_648027.3 Gene:loj / 38698 FlyBaseID:FBgn0061492 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_556725.4 Gene:loj / 3290091 VectorBaseID:AGAMI1_013255 Length:406 Species:Anopheles gambiae


Alignment Length:215 Identity:146/215 - (67%)
Similarity:179/215 - (83%) Gaps:1/215 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LIDVTSAQEAQQPWYENLPAVAMDYKVHIDAGKEDCYHQYVKAGATFYVSFSVVRGGDGMAGFAV 88
            ::.:....|..:||||.||||||||||||||||||||.|||:.|:|.||||.|:|||||||||||
Mosquito   192 VVSLQDIPEHDRPWYEMLPAVAMDYKVHIDAGKEDCYFQYVQQGSTLYVSFHVIRGGDGMAGFAV 256

  Fly    89 RNPAGEVVKPYQWQATADYTDQVSPGGYYSVCIDNQFSRFAGKLVNIYITVVKYDAWDKYAKEIE 153
            |||.||:|.||||||::||||..:.||:|:|||||||||||.||||:||||::|:.|:|:.||||
Mosquito   257 RNPRGEIVHPYQWQASSDYTDGAAMGGFYAVCIDNQFSRFASKLVNLYITVIRYEEWEKFTKEIE 321

  Fly   154 QLQLNMQNFTATVGTVERNINDMMGYQAHSRHRESRDYALLLDNNAYIQTFSISQIVVILITCSV 218
            .|.:||.|||.|:.|||||:|.|..||||||:.|:|||||:|||||||..:|:.||:||:.|.||
Mosquito   322 DLNVNMNNFTGTISTVERNLNAMFQYQAHSRNNEARDYALILDNNAYIWKWSVLQILVIVFTTSV 386

  Fly   219 QVFFVRKLFEVKS-SSKSRI 237
            ||:||||||::|: |.||||
Mosquito   387 QVYFVRKLFDIKTGSGKSRI 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lojNP_648027.3 EMP24_GP25L 47..228 CDD:426051 128/180 (71%)
lojXP_556725.4 None

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