DRSC/TRiP Functional Genomics Resources

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Protein Alignment loj and C26C6.9

DIOPT Version :9

Sequence 1:NP_648027.3 Gene:loj / 38698 FlyBaseID:FBgn0061492 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_001021011.1 Gene:C26C6.9 / 259317 WormBaseID:WBGene00007743 Length:217 Species:Caenorhabditis elegans


Alignment Length:202 Identity:52/202 - (25%)
Similarity:89/202 - (44%) Gaps:66/202 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 CYHQYVKAGATFYVSFSVVRGGDGMAGFAVRNPAGEVVKPYQWQATA---DYTDQVS-------- 112
            ||::.::.|....:         ||      .|..:.|.|.|::.|:   |::|..|        
 Worm    44 CYYEPLETGMILNI---------GM------RPTFDTVYPMQFRVTSPSGDFSDWASGDGDAHME 93

  Fly   113 ----PGGYYSVCIDNQFSRFAGKLVNIYITVVKYDAWDKYAKEIEQLQLNMQNFTATVGTVERNI 173
                ..|.|.:|:   ::|...| :|:|:..  |:.        |:::.:::.|.|. ..:.::|
 Worm    94 HNTTENGPYEICV---YTRRPMK-INLYLQF--YNP--------EKMENSLKTFFAH-HQISKDI 143

  Fly   174 -NDMMGYQAHSRHR--------------ESRDYALLLDNNAYIQTFSI-SQIVVILITCSVQVFF 222
             |.:|.    |.||              ..||.||.|.|:.:||.::| ..||.|:||.| ||::
 Worm   144 QNSIMA----STHRIYKIYYHLKFYNQMVVRDEALQLQNSEFIQNYNIVFCIVAIIITIS-QVYY 203

  Fly   223 VRKLFEV 229
            |||||.:
 Worm   204 VRKLFRI 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lojNP_648027.3 EMP24_GP25L 47..228 CDD:279450 51/199 (26%)
C26C6.9NP_001021011.1 EMP24_GP25L 34..209 CDD:366467 51/199 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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