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Protein Alignment loj and Tmed1

DIOPT Version :9

Sequence 1:	NP_648027.3	Gene:	loj / 38698	FlyBaseID:	FBgn0061492	Length:	237	Species:	Drosophila melanogaster
Sequence 2:	NP_034874.2	Gene:	Tmed1 / 17083	MGIID:	106201	Length:	227	Species:	Mus musculus

Alignment Length:	215	Identity:	50/215 - (23%)
Similarity:	96/215 - (44%)	Gaps:	13/215 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    23 LLIDVTSAQEAQQPWYENLPAVAMDYKVHIDAGKEDCYHQYVKAGATFYVSFSVVRGGDGM-AGF 86
            ||:......||..|     |....::...:.||::.|::|...|.|:....:.|: ||.|: ..|
Mouse    14 LLLPAVGVGEAGPP-----PIQDGEFTFLLPAGRKQCFYQSAPANASLETEYQVI-GGAGLDVDF 72

  Fly    87 AVRNPAGEVVKPYQWQATADYTDQVSPGGYYSVCIDNQFSRFAGKLVNIYITVVKY------DAW 145
            .:.:|.|.::.....:|...:|.:.:..|.|.:|.||.||..:.|||...:....:      :.|
Mouse    73 TLESPQGVLLVSESRKADGVHTVEPTEAGDYRLCFDNSFSTISEKLVFFELIFDSFQDEEEVEGW 137

  Fly   146 DKYAKEIEQLQLNMQNFTATVGTVERNINDMMGYQAHSRHRESRDYALLLDNNAYIQTFSISQIV 210
            .:..:..|.|.:.|::...::.|:...:...:......|..|:||..|..||...:..:|.:.:.
Mouse   138 AEAVEPEEMLDVKMEDIKESIETMRTRLERSIQMLTLLRAFEARDRNLQEDNLERVNFWSAANVA 202

  Fly   211 VILITCSVQVFFVRKLFEVK 230
            |:|:...:||..:::.|..|
Mouse   203 VLLLVAVLQVCTLKRFFHDK 222

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.