Protein Alignment loj and tmed6

DIOPT Version :10

• Sequence 1: NP_648027.3
• Gene: loj / 38698
• FlyBaseID: FBgn0061492
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: XP_005163268.1
• Gene: tmed6 / 101884766
• ZFINID: ZDB-GENE-131121-182
• Length: 240
• Species: Danio rerio
• Alignment Length: 226
• Identity: 52/226 - (23%)
• Similarity: 100/226 - (44%)
• Gaps: 20/226 - (8%)

  Fly    19 ICCCLLIDVTSAQEAQQPWYENL-PAVAMDYKVHIDAGKEDCYHQYVKAGATFYVSFSV--VRGG 80
            :||.:.:.|..:...|....|.| .:...|:.:.:.|....|:..:...|..||::|.|  |.|.
Zfish     8 MCCVVFVCVCVSAAPQLSDQELLWGSDQYDFSIMLRAADLQCFWHFAHYGEHFYLNFMVQLVTGV 72

  Fly    81 --DGMAGFAVRNPAGEVVKPYQWQATADYTDQVSPGGYYSVCIDNQFSRFAGKLVNIYITV-VKY 142
              |......|..|:|.:|.... .|:......|...|:|.:|..|..:||..  :.:::.. |.|
Zfish    73 ALDRHLSVMVNAPSGLIVGKVD-DASGQIAFSVKETGFYQMCFSNFHNRFGS--MQVFLDFGVYY 134

  Fly   143 DAWDKYAK-----------EIEQLQLNMQNFTATVGTVERNINDMMGYQAHSRHRESRDYALLLD 196
            |..:...|           :::|:...:.....:.|.::|.:..|..:..:.|.|...|:.||..
Zfish   135 DGQENAEKRKEDEKKRKEEDLKQINSTLSVIEESSGRLQRFVFHMWRHYNYERMRRGADFYLLQS 199

  Fly   197 NNAYIQTFSISQIVVILITCSVQVFFVRKLF 227
            |::||.::|.:|.::|:....:|::.:|:||
Zfish   200 NSSYISSWSAAQSLMIISAGVLQLWGIRRLF 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
loj	NP_648027.3	EMP24_GP25L	47..228	CDD:426051	46/197 (23%)
tmed6	XP_005163268.1	EMP24_GP25L	37..231	CDD:426051	46/197 (23%)