DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10469 and F12

DIOPT Version :10

Sequence 1:NP_648025.1 Gene:CG10469 / 38696 FlyBaseID:FBgn0035678 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:273 Identity:80/273 - (29%)
Similarity:122/273 - (44%) Gaps:47/273 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FGQETGSL-RIMNGTAAKAKQLPYQVGLLCYFEGSKDEPNMCGGTILSNRWIITAAHCLQ--DPK 76
            |.:...|| |::.|..|.....||...|  |:..|     .|.|:::...|::|||||||  ...
  Rat   352 FRKRLSSLRRVVGGLVALPGSHPYIAAL--YWGDS-----FCAGSLIDPCWVLTAAHCLQKRPAP 409

  Fly    77 SNLWKVLIHVGKVKSFDDKEIVVNRSYTIVHKKFDRKTVTNDIALIKLPKK----LTFNKYIQPA 137
            ..|..||......:|.:..:.:...||.: |:.|..||..:|:||::|..:    ...:.::||.
  Rat   410 EELTVVLGQDRHNQSCERCQTLAVHSYRL-HEGFSSKTYQHDLALLRLRGRKNSCAILSPHVQPV 473

  Fly   138 KLPSA----KKTYTGRKAIISGWG--LTTKQLPSQVLQYIRAPIISNKECERQWNKQLGGKSKKV 196
            .|||:    .:|..   ..::|||  ....:..:..||..:.|.||...|           |...
  Rat   474 CLPSSAAPPSETVL---CEVAGWGHQFEGAEEYATFLQEAQVPFISLDRC-----------SSSN 524

  Fly   197 VHN-----GFICIDSKKG--LPCRGDSGGPMVLDDG----SRTLVGIVSHGFDGECKLKLPDVST 250
            ||.     |.:|....:|  ..|:||||||:|.|:|    ..||.|::|.| .|......|.|.|
  Rat   525 VHGDAILPGMLCAGFLEGGADACQGDSGGPLVCDEGVTERQLTLRGVISWG-SGCGDRNKPGVYT 588

  Fly   251 RVSSYLKWIKYYS 263
            .|::||.||:.::
  Rat   589 DVANYLDWIQEHT 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10469NP_648025.1 Tryp_SPc 23..259 CDD:214473 75/258 (29%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 76/260 (29%)
Blue background indicates that the domain is not in the aligned region.

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