DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10469 and Cela3b

DIOPT Version :9

Sequence 1:NP_648025.1 Gene:CG10469 / 38696 FlyBaseID:FBgn0035678 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001100162.1 Gene:Cela3b / 298567 RGDID:1307819 Length:269 Species:Rattus norvegicus


Alignment Length:275 Identity:89/275 - (32%)
Similarity:138/275 - (50%) Gaps:31/275 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ILQLVLIVQFSLVFGQET--GSLRIMNGTAAKAKQLPYQVGLLCYFEGSKDEPNMCGGTILSNRW 64
            :|..:|:|..:...||.:  .|.|::||..|.....|:||.|....:||..  :.||||:::..|
  Rat     4 LLCSLLLVALASGCGQPSYNPSSRVVNGEDAVPYSWPWQVSLQYEKDGSFH--HTCGGTLIAPDW 66

  Fly    65 IITAAHCLQDPKSNLWKVLIHVGK----VKSFDDKEIVVNRSYTIVHKKFDRKTVT--NDIALIK 123
            ::||.||:.  .|..::|::  |:    |:...::.|.||.....||.|::...|:  |||||:|
  Rat    67 VMTAGHCIS--TSRTYQVVL--GEFERGVEEGPEQVIPVNAGDLFVHPKWNSNCVSCGNDIALVK 127

  Fly   124 LPKKLTFNKYIQPAKLPSAKKTY-TGRKAIISGWG--LTTKQLPSQVLQYIRAPIISNKECERQW 185
            |.:.......:|.|.||.|.:.. .|....|||||  .|...||.: ||....|::....|.: |
  Rat   128 LSRSAQLGDTVQLACLPPAGEILPNGAPCYISGWGRLSTNGPLPDK-LQQALLPVVDYAHCSK-W 190

  Fly   186 NKQLGGKSKKVVHNGFICI--DSKKGLPCRGDSGGPM--VLDDGSRTLVGIVSHGFDGECK-LKL 245
            : ..|...||.:    :|.  |.:.|  |.||||||:  ..::|:..:.|:.|......|. ||.
  Rat   191 D-WWGFSVKKTM----VCAGGDIQSG--CNGDSGGPLNCPAENGTWQVHGVTSFVSSLGCNTLKK 248

  Fly   246 PDVSTRVSSYLKWIK 260
            |.|.||||::.:||:
  Rat   249 PTVFTRVSAFNEWIE 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10469NP_648025.1 Tryp_SPc 23..259 CDD:214473 81/249 (33%)
Tryp_SPc 24..260 CDD:238113 81/249 (33%)
Cela3bNP_001100162.1 Tryp_SPc 27..262 CDD:214473 81/249 (33%)
Tryp_SPc 28..265 CDD:238113 82/251 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 143 1.000 Inparanoid score I4367
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.