DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10469 and CG30088

DIOPT Version :9

Sequence 1:NP_648025.1 Gene:CG10469 / 38696 FlyBaseID:FBgn0035678 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:290 Identity:90/290 - (31%)
Similarity:132/290 - (45%) Gaps:62/290 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MILQLVLIVQFSL----VFGQETGSLRIMNGTAAKAKQLPYQVGLLCYFEGSKDEPNMCGGTILS 61
            ::||..:...|.:    |..:...:.||:.|..|..|..|:...|  |:.....    |||||:|
  Fly    18 LVLQEQVAANFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYL--YYSSEIH----CGGTIIS 76

  Fly    62 NRWIITAAHCLQDPKSNLWKVLIHVGK-----------------VKSFDDKEIVVNRSYTIVHKK 109
            :|:|:|||||::.      .:.:.:|:                 .:.||   ||:...|    |:
  Fly    77 SRYILTAAHCMRP------YLKVRLGEHDITRNPDCQGGSCSPPAEEFD---IVLATKY----KR 128

  Fly   110 FDRKTVTNDIALIKLPKKLTFNKYIQPAKL---PSAKKTYTGRKAIISGWGLTTKQLPSQVLQYI 171
            ||| .:.|||||:||.:.:.||.:|||..|   |:|.......:|.  |||.|.....:.|||..
  Fly   129 FDR-FLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAF--GWGQTETNHSANVLQTT 190

  Fly   172 RAPIISNKECERQWNKQLGGKSKKVVHNGFICIDSKKGLPCRGDSGGPMVLD---DGS-RTL-VG 231
            ......|:.|.       ...|..:..|. :|:..:....|.||||||:|..   ||. |.| :|
  Fly   191 VLTRYDNRHCR-------SVLSMPITINQ-LCVGFQGSDTCSGDSGGPLVTKVNYDGVWRYLQLG 247

  Fly   232 IVSHGFDGECKLKLPDVSTRVSSYLKWIKY 261
            |||.|.|   |.:.|.|.|.|.:|::||:|
  Fly   248 IVSFGDD---KCQSPGVYTYVPNYIRWIRY 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10469NP_648025.1 Tryp_SPc 23..259 CDD:214473 83/260 (32%)
Tryp_SPc 24..260 CDD:238113 83/260 (32%)
CG30088NP_725488.3 Tryp_SPc 44..272 CDD:214473 83/260 (32%)
Tryp_SPc 45..273 CDD:238113 83/260 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436468
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.