DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10469 and svh-1

DIOPT Version :9

Sequence 1:NP_648025.1 Gene:CG10469 / 38696 FlyBaseID:FBgn0035678 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:254 Identity:74/254 - (29%)
Similarity:122/254 - (48%) Gaps:28/254 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIMNGTAAKAKQLPYQVGLLCYFEGSKDEPNMCGGTILSNRWIITAAHCL-QDPKSNLWKVLIHV 86
            |::.|........|:...|    .....:.:.||.:||....:||||||. :|.:.:.::|:   
 Worm   712 RVVGGFETVPGAFPWTAAL----RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVV--- 769

  Fly    87 GKVKSFDDKEIVVNRSYTIVHK----KFDRKTVTNDIALIKLP-KKLTFNKYIQPAKLPSAKKTY 146
              |..:|:.:...|.....:.:    ...:...::|||::::| ..:.||:|.||..|||....|
 Worm   770 --VGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVY 832

  Fly   147 T-GRKAIISGWGLTTKQLPSQVLQYIRAPIISNKECERQWNKQLGGKSKKVVHNGFI--CIDSKK 208
            | ||:.::||||....:. ::.||....|||:..:|... ::.....|:.....|::  .|||  
 Worm   833 TPGRQCVVSGWGSMGLRY-AERLQAALIPIINRFDCVNS-SQIYSSMSRSAFCAGYLEGGIDS-- 893

  Fly   209 GLPCRGDSGGPMVL--DDGSRTLVGIVSHGFDGECKLKLPDVSTRVSSYLKWIKYYSGG 265
               |:||||||...  :||:..|.|::|.| ||..:.|.|.:.|.|:.||.||.....|
 Worm   894 ---CQGDSGGPFACRREDGAFVLAGVISWG-DGCAQKKQPGIYTMVAPYLSWISAIING 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10469NP_648025.1 Tryp_SPc 23..259 CDD:214473 71/246 (29%)
Tryp_SPc 24..260 CDD:238113 71/246 (29%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 72/248 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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