DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10469 and tmprss6

DIOPT Version :10

Sequence 1:NP_648025.1 Gene:CG10469 / 38696 FlyBaseID:FBgn0035678 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:259 Identity:71/259 - (27%)
Similarity:127/259 - (49%) Gaps:33/259 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GQETGSLRIMNGTAAKAKQLPYQVGLLCYFEGSKDEPNMCGGTILSNRWIITAAHCLQDPKS--- 77
            |.:...:|::.||.|:..:.|:|..|....|      ::||||:::::||:|||||. .|:|   
 Frog   563 GIQAVGIRLVGGTQAQEGEWPWQASLQVRGE------HICGGTLVADQWILTAAHCF-TPESYAS 620

  Fly    78 -NLWKVLIHVGKVK--SFDDKEIVVNRSYTIVHKKFDRKTVTNDIALIKLPKKLTF-NKYIQPAK 138
             .:|.|  ::|||:  ....||:.......::|..:|..:...|:||:.|...:.. :.::||..
 Frog   621 PEVWTV--YLGKVRLSRSTQKELAFKVIRLVIHPFYDEDSHDYDVALVLLDHLVPLTSPHVQPIC 683

  Fly   139 LPSAKKTY-TGRKAIISGWGLTTKQLP-SQVLQYIRAPIISNKECERQWNKQLGGKSKKVVHNGF 201
            |||:...: ||....::|||...:..| |.|||.:...:::...|...:..|:..:        .
 Frog   684 LPSSTHHFPTGSSCWVTGWGSVKENGPTSDVLQKVDIQLVAQDICTELYRYQISPR--------M 740

  Fly   202 ICIDSKKGL--PCRGDSGGPMVLD--DGSRTLVGIVSHGFDGECKL-KLPDVSTRVSSYLKWIK 260
            :|...:.|.  .|:||||.|:|..  .|.....|:||.|  ..|.: :...|.:|::..::||:
 Frog   741 LCAGYRDGSKDACQGDSGSPLVCKTASGRWFQAGLVSWG--AGCGIPRYFGVYSRITRLVQWIE 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10469NP_648025.1 Tryp_SPc 23..259 CDD:214473 68/249 (27%)
tmprss6XP_004913946.2 SEA 77..174 CDD:460188
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060
Tryp_SPc 572..804 CDD:238113 69/250 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.