DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssp6 and PDZD7

DIOPT Version :9

Sequence 1:NP_001286952.1 Gene:ssp6 / 38694 FlyBaseID:FBgn0035676 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001182192.1 Gene:PDZD7 / 79955 HGNCID:26257 Length:1033 Species:Homo sapiens


Alignment Length:739 Identity:131/739 - (17%)
Similarity:201/739 - (27%) Gaps:333/739 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ATSVGSLIAAACQQEQPHPHQHYSQSQQQHLYHQSHQQASHYVNGTGSLGRLKFHKSLDASDEEI 98
            :|::||.:..            .:.|.:.|:          .|...|.:..:||.|      |:.
Human   143 STTMGSAVKV------------LTSSSRLHM----------MVRRMGRVPGIKFSK------EKT 179

  Fly    99 EYAQLSRSTHILGRHKSERYLASNP----DEDRRRRTIIVEKKNNSYGFTLQSYGIHYKRDEELE 159
            .:..      ::.|........|.|    .||..||  ||.....|..|.|   |.:.:..:|..
Human   180 TWVD------VVNRRLVVEKCGSTPSDTSSEDGVRR--IVHLYTTSDDFCL---GFNIRGGKEFG 233

  Fly   160 MITYVDYVEYGGPAYRAGMREGDVILSINGKDMEKADHKTIVEFIK------------------- 205
            :..||..|::||.|...|::.||.:|:.||...:...|...||.:|                   
Human   234 LGIYVSKVDHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHIMLTIKETGRYPAYK 298

  Fly   206 ----------------------------------------------------------------- 205
                                                                             
Human   299 EMVSEYCWLDRLSNGVLQQLSPASESSSSVSSCASSAPYSSGSLPSDRMDICLGQEEPGSRGPGW 363

  Fly   206 -QCDTRMR-----------------MVVLFEDCVRKVDLH------------------------- 227
             :.||.|:                 .|:|.:..:|....|                         
Human   364 GRADTAMQTEPDAGGRVETWCSVRPTVILRDTAIRSDGPHPGRRLDSALSESPKTALLLALSRPR 428

  Fly   228 ------MRYIQLQSMLQQKMNEL-----ERVHL-RERELLE-----GKWKTHSLPARKKA----- 270
                  ..|:.|....||:..|.     |:..| |.:.|:.     |:....:...|::|     
Human   429 PPITRSQSYLTLWEEKQQRKKEKSGSPGEKGALQRSKTLMNLFFKGGRQGRLARDGRREAWTLDS 493

  Fly   271 --NANTSP----SDGEGVSPTEV--------AGEAGFYRPALS------TEDVPNIAAR-QHGVG 314
              .|.|.|    ....||.|.:.        ..|.|  |..||      :..:||:..: |....
Human   494 GSLAKTYPRLDIEKAGGVGPVQKFVTWRLRRDQERG--RALLSARSGSPSSQLPNVDEQVQAWES 556

  Fly   315 GPGIIPPPAQFMLTYHYLDPTYRYVLRPTH-GSSEEFVDGL--GLQRSSSDHQPPAQRYVLQQTE 376
            ...:|...||.:||...:....|:..|..| |..|:.|..|  .|.|       |.:..:||...
Human   557 RRPLIQDLAQRLLTDDEVLAVTRHCSRYVHEGGIEDLVRPLLAILDR-------PEKLLLLQDIR 614

  Fly   377 SVDANSMTQPTTTAPTQ---------------YHSTTGGSVKPPA--------PPPRTCEKHKPP 418
            ||          .|||.               :.:....:|:|||        ||.|......|.
Human   615 SV----------VAPTDLGRFDSMVMLVELEAFEALKSRAVRPPALRPARQDTPPKRHLITPVPD 669

  Fly   419 AK------PPK--PEKE-----------------KSSGKHCHVGHSCNPCLGHFRWKSAEKSAVP 458
            ::      |..  ||:|                 .|:.:|.|.|                   :|
Human   670 SRGGFYLLPVNGFPEEEDNGELRERLGALKVSPSASAPRHPHKG-------------------IP 715

  Fly   459 APDNVSLDAYD-------------------------LASPCCDTHCVPSRRRHRQHKEHTHKHKH 498
            ...:|.:||:.                         |..|....|...|:.|.|.      :.:.
Human   716 PLQDVPVDAFTPLRIACTPPPQLPPVAPRPLRPNWLLTEPLSREHPPQSQIRGRA------QSRS 774

  Fly   499 RDRERVESKEQRVRPKSTSHASPN 522
            |.|.|..|:..|.:.||....||:
Human   775 RSRSRSRSRSSRGQGKSPGRRSPS 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ssp6NP_001286952.1 PDZ_signaling 130..216 CDD:238492 28/187 (15%)
PDZD7NP_001182192.1 PDZ_signaling 84..164 CDD:238492 5/42 (12%)
PDZ_signaling 209..289 CDD:238492 24/84 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..380 3/56 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..464 5/19 (26%)
HN_PDZD7_like 554..630 CDD:259824 22/92 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..864 14/51 (27%)
PDZ_signaling 860..948 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 943..1033
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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