DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ssp6 and Slc9a3r1

DIOPT Version :9

Sequence 1:NP_001286952.1 Gene:ssp6 / 38694 FlyBaseID:FBgn0035676 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_067605.1 Gene:Slc9a3r1 / 59114 RGDID:708538 Length:356 Species:Rattus norvegicus


Alignment Length:329 Identity:73/329 - (22%)
Similarity:127/329 - (38%) Gaps:83/329 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 RTIIVEKKNNSYGFTLQSYGIHYKRDEELEMITYVDYVEYGGPAYRAGMREGDVILSINGKDMEK 194
            |...:||..|.|||.|..        |:.::..::..||.|.||.::|:..||.::.:||:::||
  Rat    13 RLCCLEKGPNGYGFHLHG--------EKGKVGQFIRLVEPGSPAEKSGLLAGDRLVEVNGENVEK 69

  Fly   195 ADHKTIVEFIKQCDTRMRMVVL---FEDCVRKVDLHMRYIQLQSMLQQK---------------- 240
            ..|:.:|..|:.....:|::|:   .::.::|:.:.:|...|::  |:|                
  Rat    70 ETHQQVVSRIRAALNAVRLLVVDPETDEQLKKLGVPIREELLRA--QEKSEHTEPPAAADTKKAG 132

  Fly   241 -MNELERVHLRERELLEGKWKTHSLPARKKANANTSPS-DGEGV------SPTEVAGEAGFYRPA 297
             .||.|:.||...||..........|.....|.::..| .|:.:      ||.|.:|        
  Rat   133 DQNEAEKSHLERCELRPRLCTMKKGPNGYGFNLHSDKSKPGQFIRAVDPDSPAEASG-------- 189

  Fly   298 LSTED----VPNIA--ARQHG-------VGGPGIIPPPAQFMLTYHYLDPTYRYVLRPTHGSSEE 349
            |..:|    |..:.  .:|||       .||     ..|:.::.....|..:: ..|.|  .|:|
  Rat   190 LRAQDRIVEVNGVCMEGKQHGDVVSAIKAGG-----DEAKLLVVDKETDEFFK-KCRVT--PSQE 246

  Fly   350 FVDG-----------------LGLQRSSSDHQPPAQRYVLQQTESVDANSMTQPTTTAPTQYHST 397
            .:||                 ..|...:|:...||.........|.:.|:...|.....|:..||
  Rat   247 HLDGPLPEPFSNGEIQKENSREALVEPASESPRPALARSASSDTSEELNAQDSPKRHDSTEPSST 311

  Fly   398 TGGS 401
            :..|
  Rat   312 SSSS 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ssp6NP_001286952.1 PDZ_signaling 130..216 CDD:238492 25/85 (29%)
Slc9a3r1NP_067605.1 PDZ_signaling 12..91 CDD:238492 25/85 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..142 5/30 (17%)
PDZ_signaling 149..228 CDD:238492 17/91 (19%)
EBP50_C 232..356 CDD:286142 18/87 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..356 11/51 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.