DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssp6 and tamalin

DIOPT Version :9

Sequence 1:NP_001286952.1 Gene:ssp6 / 38694 FlyBaseID:FBgn0035676 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001035013.1 Gene:tamalin / 558950 ZFINID:ZDB-GENE-060312-30 Length:382 Species:Danio rerio


Alignment Length:358 Identity:86/358 - (24%)
Similarity:140/358 - (39%) Gaps:79/358 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SDEEIEYAQLSRSTHILGRH-------KSERYLASNPDEDRRRRTIIVEKK-NNSYGFTLQSYGI 150
            |.|...|..|:.|...|.|:       :..:.||.:|:.  :|:|:|:||| ..|:||.:|:||:
Zfish    49 STEVYNYKTLAYSGGTLPRNFKKNGGLQKWKPLAQSPEP--QRKTVILEKKEEESFGFEIQTYGL 111

  Fly   151 HYKRDEELEMITYVDYVEYGGPAYRAGMREGDVILSINGKDMEKADHKTIVEFIKQCDTRMRMVV 215
            |::.:..:||.|:|..|....||..||::.||.|.|:|...::...||.||:.||.....:|:..
Zfish   112 HHQSENSVEMCTFVCKVHEDSPALLAGLKVGDTIASVNDTSVDGFRHKEIVQLIKSSGNNIRLET 176

  Fly   216 LFEDCVRKVDLHMRYIQLQSMLQQKMNELERVHLRERELLEGKWKTHSLPARKKANANTSPSDGE 280
            ::.|.:||.:|..|...|:..|.:|.:|...:.::|:.|:.|                       
Zfish   177 VYSDSIRKAELEARLQYLKQTLHEKWDEYRSLMVQEQRLVHG----------------------- 218

  Fly   281 GVSPTEVAGEAGFYRPALSTEDVPNIAARQHGVGGPGIIPPPAQFMLTYHYLDPTYRYVLRPTHG 345
                 .|..:...|....|.           ||.|....|.||               .||...|
Zfish   219 -----IVMSDVAMYESLESA-----------GVYGSLGAPSPA---------------ALRALRG 252

  Fly   346 SSEEFVDGLGLQRSSSDHQPPAQRYVLQQTESVDANSMTQPT------------TTAPTQYHSTT 398
            :.........|..::::..|..|..:...|.:...::..:.|            |||.|..  |.
Zfish   253 TDSTSSSVSHLSAATAEDDPLYQTCIFNNTSNDQIHAKQENTRPRLIRPASELFTTAKTSL--TR 315

  Fly   399 GGSVKPPAPPPRTCEKHKPPAKPPKPEKEKSSG 431
            ..|.:....||.:.......| .|..||::..|
Zfish   316 SASTRSYLRPPSSSSSASSSA-VPNGEKQQCGG 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ssp6NP_001286952.1 PDZ_signaling 130..216 CDD:238492 33/86 (38%)
tamalinNP_001035013.1 PDZ_signaling 90..175 CDD:238492 33/84 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580701
Domainoid 1 1.000 67 1.000 Domainoid score I9805
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003007
OrthoInspector 1 1.000 - - otm25599
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15963
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5608
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.830

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