DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssp6 and slc9a3r1

DIOPT Version :9

Sequence 1:NP_001286952.1 Gene:ssp6 / 38694 FlyBaseID:FBgn0035676 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001006751.1 Gene:slc9a3r1 / 448423 XenbaseID:XB-GENE-487362 Length:320 Species:Xenopus tropicalis


Alignment Length:387 Identity:81/387 - (20%)
Similarity:136/387 - (35%) Gaps:109/387 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 RTIIVEKKNNSYGFTLQSYGIHYKRDEELEMITYVDYVEYGGPAYRAGMREGDVILSINGKDMEK 194
            |..::||.::.|||.|.|        |:.....||..||.|..|.:||:|.||.::.:.|:|:.:
 Frog     5 RVCVLEKGDSGYGFHLHS--------EKTRPGQYVRLVEPGSAAEKAGLRAGDRLIRVCGEDVRE 61

  Fly   195 ADHKTIVEFIKQCDTRMRMVVLFEDCVRKVDLHMRYIQLQSMLQQKMNELERVHLRER--ELLEG 257
            ..|:.:|..|:....::.:.|  :....:|.......:.::..:|....|:|..||.|  .:.:|
 Frog    62 LGHQQVVSKIRAATEKLTLEV--QGVEEEVAPSSPKEENKATEKQPTPVLDRKELRPRLCTIKKG 124

  Fly   258 K----WKTHSLPARK----KANANTSPSDGEGVSP----TEVAGEAGFYRPALSTEDVPNIAARQ 310
            .    :..||.....    :|....||::..|:.|    .||.|              .|:..:|
 Frog   125 PSGFGFNLHSDKVHPGQFVRAVDPDSPAELAGLLPKDRIVEVNG--------------LNVIGKQ 175

  Fly   311 HG-------VGGPGIIPPPAQFMLTYHYLDPTYRYVLRPTHGSSEEFVDGLGLQRSSSDHQPPAQ 368
            ||       .||                 |.|...||.|...|..:..:.:           |.:
 Frog   176 HGDVVAAIKAGG-----------------DETSLLVLDPEADSYFKECNVV-----------PGK 212

  Fly   369 RYVLQQTESVDANSMTQPTTTAPTQYHSTTGGSVKPPAPPPRTCEKHKPPAKPPKPEKEKSSGKH 433
            :::........||...:....:..|.|..:..|...|||...|          ||.|.:|.|.::
 Frog   213 QHLTGPLPEKLANGGLEKLNNSEEQIHPESPLSSPEPAPDMVT----------PKLEAQKDSSEN 267

  Fly   434 CHVGHSCNPCLGHFRWKSAEKSAVPAPDNVSLDAYDLASPCCDTHCVPSRRRHRQHKEHTHK 495
                                   .|||   :.||.....|..|.:...:..:.|.|::.:.|
 Frog   268 -----------------------TPAP---ASDATSPTEPVLDLNMSLALAKERAHQKRSQK 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ssp6NP_001286952.1 PDZ_signaling 130..216 CDD:238492 25/85 (29%)
slc9a3r1NP_001006751.1 PDZ_signaling 4..83 CDD:238492 26/87 (30%)
PDZ_signaling 116..195 CDD:238492 20/109 (18%)
EBP50_C 199..320 CDD:370238 26/152 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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