Protein Alignment ssp6 and Fife

DIOPT Version :9

• Sequence 1: NP_001286952.1
• Gene: ssp6 / 38694
• FlyBaseID: FBgn0035676
• Length: 866
• Species: Drosophila melanogaster
• Sequence 2: NP_001261340.1
• Gene: Fife / 38337
• FlyBaseID: FBgn0264606
• Length: 1314
• Species: Drosophila melanogaster
• Alignment Length: 874
• Identity: 159/874 - (18%)
• Similarity: 261/874 - (29%)
• Gaps: 270/874 - (30%)

  Fly   121 SNPDEDRRRRTII----VEKKNNSYGFTLQSYGIHYKRDEELEMITYVDYVEYGGPAYRAGMREG 181
            |.|....:||.|:    .:|.:.:.||.::..|  .|...:..:..|:.:...||.|.:.|:::|
  Fly   483 SGPICASKRRIILRRDPTDKAHRTRGFGMRVVG--GKTGADGRLFAYIVWTVPGGAAEKNGLQQG 545

  Fly   182 DVILSINGKDMEKADHK------------TIVEFIKQCDTRMRMVVLFEDCV------------- 221
            |.||..||  |...|..            .:||.:.:..|..||..||::.:
  Fly   546 DKILEWNG--MSLIDRSFEEVCSIMDRTGDVVELLVEHATDFRMCDLFDENLPPGNAGGQSGPRR 608

  Fly   222 ---------------------------RKVDLHMRYIQLQSMLQQKMNELERVHLRERELLEGKW 259
                                       ||:......|..:.::..::......|....||:....
  Fly   609 SGDGPVGLGLIAEPETTTDKSPASPTRRKLPKTPEQIAREKLVTGRVQIQVWYHAERSELVVSLM 673

  Fly   260 KTHSLPARKKANANTS-----------PSDGEG-VSPTEVAGEAGFYRPALSTEDVPNIAARQHG 312
            ....|..|.:|..:.:           |..|:| |..|||:      ||..:
  Fly   674 AGDDLAPRDEAYGHGNLPEAYAKVRILPKCGDGSVQQTEVS------RPTQN------------- 719

  Fly   313 VGGPGIIPPPAQFMLTYHYLDP---TYRYV------LRPTHGSSEEFVDG---LGLQRSSSDHQP 365
                    |.....||:.::..   ..||:      |.|   .:|....|   :.||::..|.|.
  Fly   720 --------PIWNATLTFGHVKADTLMVRYIDIQLWDLVP---HTESIFLGECSIELQQAFLDDQA 773

  Fly   366 PAQRYVLQQTESVDANSMTQPTTTAPTQYHSTTGGSVKPPAPPPRTCEKHKPPAKPPKPEKEK-- 428
            ...|  |:.|:.:...|:::..:.:|.  .|...|:..|.....|...:.....:....:.:.
  Fly   774 IWCR--LEDTKGLRGISISKSPSVSPR--GSIAAGAGAPSGDVTRLLRRDYNMQRSNSDDVDSIG 834

  Fly   429 SSGKHCHVGHSCNPCLGHFRWKSAEKSAVPAPDNVSLDAYDLASPCCDTHCVPSRRRHRQHKEHT 493
            ......|..|:         |.:..:......:.:.::.|.|....  :..:|..||
  Fly   835 DGTSLLHPDHA---------WIAGSRRGSSQSETMEVEVYQLGKDF--SRSLPGSRR-------- 880

  Fly   494 HKHKHRDRERVESKEQRVRP---------KSTSHASPN--------ANGGAGS----GHHHHHHH 537
            ...:..::.|:|.......|         .|.:...|:        ..|..|.    |...|...
  Fly   881 SSFQDAEKNRLEEDAMATPPTSYLVGRRRSSVARRDPDEILKSLKAVRGELGRTMSLGTEQHKRM 945

  Fly   538 HHH---------------------SHEQQQQQQQQQQQQQQQQQQQQQQQPI-----QTVP---- 572
            ...                     |.:.|||.||.||.|.||||..|||.|:     .|.|
  Fly   946 GSRRASRVGLPSGPSSRKSSVLDLSQQHQQQLQQLQQLQLQQQQYLQQQLPMGVGNADTSPPSED 1010

  Fly   573 -HHHHYPHQMHNPCQVQSQS---GSTRSRYFDLASGLASHCS----------LHSCTSSEFATGD 623
             ...:.|....:..|:..||   ..:|.:....||.:|....          |....||.|..|:
  Fly  1011 EDKRYRPRWKGSVSQLPPQSPKQALSRLKQAASASNVAQDTQRQGQLLTTNPLQQRKSSMFQLGE 1075

  Fly   624 TASYTTSISTDTLFWDPTSETAQSRQHSTKSRQSYEQQPQQQQPTHQGHHHHHHHQGDYHQRYHV 688
            :.:.           .||:.|...::..:.......:.|....||         .:|..:||..|
  Fly  1076 SQAS-----------PPTTTTTHLQRKGSMYVAKVTETPPHGTPT---------RKGSVYQRSVV 1120

  Fly   689 TTTQMQPQQIYPNTIAYVQK--PKSWDNLANKAGFNVGYGYLDTVAVKPAIKMQIAQQRHSMPRR 751
            ..:...|....|.....|.|  ..|:.|:....|....||    :.:.|:       |.|....|
  Fly  1121 GLSVDSPGADSPQRKQSVVKTLSGSYVNICPLTGGESSYG----LKLGPS-------QIHPKGYR 1174

  Fly   752 NPYGRYSTYGDVENYAPPPTEFVGELTTTTTTTITAKSTEELLAAC-------DCLTPQQQAAIK 809
            ....||                 |||   ....:..|...|:...|       ||.|| ....:|
  Fly  1175 LTTARY-----------------GEL---KMGFLKIKGNVEVELICARNIVNEDCETP-PDTYVK 1218

  Fly   810 AAQYQLSQNQKLSHQNSCQLGYYSHLPRP 838
            .   .:....:|.|:...::  ..|...|
  Fly  1219 C---YIKDGDRLRHKKKTRV--VRHAAEP 1242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssp6	NP_001286952.1	PDZ_signaling	130..216	CDD:238492	25/101 (25%)
Fife	NP_001261340.1	FYVE_BSN_PCLO	130..187	CDD:277290
		PDZ_signaling	491..580	CDD:238492	23/92 (25%)
		DegQ	<526..577	CDD:223343	14/52 (27%)
		C2A_RIM1alpha	651..779	CDD:175997	29/159 (18%)
		C2	1163..1304	CDD:301316	21/113 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3528
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900