Protein Alignment ssp6 and Lnx1

DIOPT Version :9

• Sequence 1: NP_001286952.1
• Gene: ssp6 / 38694
• FlyBaseID: FBgn0035676
• Length: 866
• Species: Drosophila melanogaster
• Sequence 2: NP_001101828.1
• Gene: Lnx1 / 360926
• RGDID: 1308159
• Length: 728
• Species: Rattus norvegicus
• Alignment Length: 114
• Identity: 31/114 - (27%)
• Similarity: 51/114 - (44%)
• Gaps: 13/114 - (11%)

  Fly   116 ERYLASNPDEDRRRRTIIVEK-KNNSYGFTLQSYGIHYKRDEELEMITYVDYVEYGGPAYRAG-M 178
            ||..:|.|......:.:.|:| .|.|.|.|:.....|    .|.::..||..||.||...|.| :
  Rat   493 ERSTSSKPAATCHEKVVSVQKDPNESLGMTVGGGASH----REWDLPIYVISVEPGGVISRDGRI 553

  Fly   179 REGDVILSINGKDMEKADHKTIVEFIKQCDTRMRMVVL-------FEDC 220
            :.||::|::||.::.:......|..:|...:.:.:..|       .|||
  Rat   554 KTGDILLNVNGIELTEVSRTEAVAILKSTPSSVVLKALEVKEQETQEDC 602

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssp6	NP_001286952.1	PDZ_signaling	130..216	CDD:238492	23/87 (26%)
Lnx1	NP_001101828.1	RING	45..81	CDD:214546
		DegQ	<260..364	CDD:223343
		PDZ_signaling	276..360	CDD:238492
		PDZ_signaling	384..464	CDD:238492
		PDZ_signaling	506..589	CDD:238492	23/86 (27%)
		PDZ_signaling	637..721	CDD:238492

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3528
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900