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Protein Alignment ssp6 and Lnx2
DIOPT Version :9
Sequence 1: | NP_001286952.1 |
Gene: | ssp6 / 38694 |
FlyBaseID: | FBgn0035676 |
Length: | 866 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001101799.1 |
Gene: | Lnx2 / 360761 |
RGDID: | 1308222 |
Length: | 686 |
Species: | Rattus norvegicus |
Alignment Length: | 137 |
Identity: | 36/137 - (26%) |
Similarity: | 54/137 - (39%) |
Gaps: | 28/137 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 LDASDEEIEYA-------QLSRSTHILGRHKSERYLASNPDEDR-------------RRRTIIVE 135
:.||.|.:... |.|..:...|.|.|.. |..|...| :.:.|.|:
Rat 406 IQASGERVNLTIARPGKPQPSNGSREAGAHSSNH--AQPPSHSRPSSHKDLTRCVTCQEKHITVK 468
Fly 136 KK-NNSYGFTLQSYGIHYKRDEELEMITYVDYVEYGGPAYRAG-MREGDVILSINGKDMEKADHK 198
|: :.|.|.|:. |....:..||.: :|..|...|...|.| ::.|||:|:|||.|:....|.
Rat 469 KEPHESLGMTVA--GGRGSKSGELPI--FVTSVPPHGCLARDGRIKRGDVLLNINGIDLTNLSHS 529
Fly 199 TIVEFIK 205
..|..:|
Rat 530 EAVAMLK 536
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3528 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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