DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssp6 and X11L

DIOPT Version :9

Sequence 1:NP_001286952.1 Gene:ssp6 / 38694 FlyBaseID:FBgn0035676 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster


Alignment Length:919 Identity:177/919 - (19%)
Similarity:264/919 - (28%) Gaps:311/919 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QQEQPHPHQHYSQSQQQHLYHQSHQQASHYVNGTGSLGRLKFHKSLDASD--EEIEYAQLSRSTH 108
            |.:|...|||..|.|||..|....:..|..|....::        |::.|  .|:.|..|...:.
  Fly    27 QAQQQQSHQHQQQQQQQERYVWEMRTRSPNVTPASTV--------LNSPDLNGELSYVPLQGLSP 83

  Fly   109 ILGRHKSERYLASNPDEDRRRRTIIVEKKNNSYGFTLQSYGIHYKRDEELEMITYVDYVEYGGPA 173
            ..|..:......||...|.                     |.:|.:..:|..|            
  Fly    84 SGGGVQGSGSYGSNAGRDS---------------------GSYYYQRPQLHQI------------ 115

  Fly   174 YRAGMREG------DVI---LSINGK--DMEKADHKTIVEFIKQCDTRMRMVVLFEDC----VRK 223
             |.|...|      ||:   |:..|.  |:.|||        .|| .|...:|:|:|.    :.|
  Fly   116 -RLGRSPGSQFETRDVLPQGLASPGSPTDVGKAD--------GQC-LRDGEIVVFDDIDTNWMNK 170

  Fly   224 VDLHMRYIQLQSMLQ-QKMNELERVHLRERELLEGKWKTHSLPAR--KKANANTSPSDGEGVSPT 285
            .....|....:.:|: .||  :.::.:.|.|         ..|.|  .:.|.||....|....| 
  Fly   171 ASSGQRPGSNEDVLKVTKM--IGQLPIAEYE---------GSPRRFGSQPNTNTITMGGPRKRP- 223

  Fly   286 EVAGEAGFYRPALSTEDVPN--IAARQHGVGG-PGIIPPPAQFMLTYHYLDPT--YRYVLRPTHG 345
                 .||.:....|..|.|  .||.:..||. ..::....:...|.....||  |.|....|..
  Fly   224 -----PGFPQRVSPTTSVANNATAAAKASVGNLIDLVDHEEERSGTLREKTPTFDYLYEFSETRK 283

  Fly   346 SSEEFVDGLGLQRSSSDHQPPAQRYVLQQTESVDANSMTQPTTTAPTQYHSTTGGSVKPPAPPPR 410
            ..|||     .:.:..|.    :||....|||.|..:.:||.....|.......|......|...
  Fly   284 VLEEF-----FKANPEDE----KRYTDYTTESGDDVASSQPQEYPATPMEQAYIGQRLARIPKDE 339

  Fly   411 TCEKHKPPAKPPKPEKEKSSGKHCHVGHSCNPCLGHFRWKSAEKSAVPAPDNVSLDAYDLASPCC 475
            ....|:.|.|.|..::              ||...:......|...    |:.|..:.|||    
  Fly   340 LYMVHRSPTKKPPSDQ--------------NPSTAYQEHNDIELYI----DSNSRSSGDLA---- 382

  Fly   476 DTHCVPSRRRHRQHKEHTHKHKHRDRERVESKEQRVRPKSTSHAS-------------------- 520
            ||....:.|||                   |:...:.|::|.:.|                    
  Fly   383 DTELEANLRRH-------------------SRNFTLSPETTDYDSNCGDLDSLSNDINCPTDFGK 428

  Fly   521 -----PNANGGAGSGHHHHHHHHHHSHEQQQQQQQQQQQQQQQQQQQQQQQPIQTVPHHHHYPHQ 580
                 |....|..|||              ....:........:||..|.||:.   .|:....:
  Fly   429 LYTSMPVLEDGLSSGH--------------ASDTENNVSVVCDKQQSSQSQPVH---EHNGNGER 476

  Fly   581 MHNPCQVQSQSGSTRSRYFDLASGLASHCSLHSCTSSEFATGDTASYTTSISTDTLFWD------ 639
            :.|...|.|.|                                .|:.||..|...|..|      
  Fly   477 LENDYNVMSAS--------------------------------LATLTTDASQSALISDFASLPM 509

  Fly   640 ----PTSETAQSRQHSTKSRQSYEQQPQQQQP--THQGHHHHHHHQGDYHQRYHVTTTQMQPQQI 698
                |.|...|.  ....:.:|....|....|  :|.|                         .:
  Fly   510 PPAPPPSSPPQI--EIADASESMTMVPDADNPLDSHYG-------------------------AV 547

  Fly   699 YPNTIAYVQKPKSWDNLANKAGFNVGY------GYLDTVA---VKPAIK-MQIAQQR-HSMPRRN 752
            |...:......||       ||..:|.      |.|.:.|   ::.|:| ::.|.|| .:.|.:.
  Fly   548 YAAALGGTHTEKS-------AGSGLGVTPVTAGGSLPSQAASEIQEAMKEIRSALQRAKTQPEKL 605

  Fly   753 PYGRYSTYGDVENYAPPPTEFVGELTTTTTTTITAKSTEELLAACDCLTPQQQAAIKAAQYQLSQ 817
            .:     ..:|....|....:|....||.:|...|.:.||  ...|..|.:.....:..:.....
  Fly   606 KF-----CDEVLPTDPDSPVWVPRKGTTISTAQGAAADEE--PDTDLETDRLLGQQRHDEQDFFA 663

  Fly   818 NQKLSHQNS---CQLGYYSHL--------PRPTTD--------------VGTSTTSQ-----QVH 852
            :|.|:..|:   ..:....||        |.|..:              :|||.|..     |:.
  Fly   664 DQSLADNNANEGTDIASNGHLNGTSDNNNPNPMNNSKPQTYSTATIRQGIGTSLTPNSPDICQIV 728

  Fly   853 GAGDVQTTS 861
            |..|:..:|
  Fly   729 GTTDISISS 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ssp6NP_001286952.1 PDZ_signaling 130..216 CDD:238492 18/96 (19%)
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919
PDZ_signaling 988..1065 CDD:238492
PDZ_signaling 1092..1151 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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